RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PDILTQ8N807 584 aa13.83□□□□□ -0.19
SLC13A3-201ENST00000279027 ZBTB38Q8NAP3 1195 aaPredicted RBP13.83□□□□□ -0.19
SLC13A3-201ENST00000279027 CBX8Q9HC52 389 aa13.83□□□□□ -0.19
SLC13A3-201ENST00000279027 RANBP6O60518 1105 aaKnown RBP13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 UVSSAQ2YD98 709 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 FAM182BQ5T319 152 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 AIFM3Q96NN9 605 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 SLC12A7Q9Y666 1083 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 PDIA3P30101 505 aaKnown RBP13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 NSUN7Q8NE18 718 aaKnown RBP13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 RASSF8Q8NHQ8 419 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 NACAP1Q9BZK3 213 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 SLC4A4Q9Y6R1 1079 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
SLC13A3-201ENST00000279027 TPM4P67936 248 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 UTYO14607 1347 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 hCG_1642624A0A1W2PR95 340 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 ZFYP08048 801 aaPredicted RBP13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 CTSWP56202 376 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 SART3Q15020 963 aaKnown RBP13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 SPECC1Q5M775 1068 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 DSCC1Q9BVC3 393 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 PRDM1O75626 825 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 PCCAP05165 728 aaPredicted RBP13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 IARSP41252 1262 aaKnown RBP13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 CCDC102BQ68D86 513 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 NLRP10Q86W26 655 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 UBAC1Q9BSL1 405 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 WWC3Q9ULE0 1092 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 DENND2AQ9ULE3 1009 aa13.82□□□□□ -0.2
SLC13A3-201ENST00000279027 CYP7A1P22680 504 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 BCAMP50895 628 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 CEP57L1Q8IYX8 460 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 NRDCO43847 1150 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 CDK11BP21127 795 aaKnown RBP13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 MCAMP43121 646 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 AOPEPQ8N6M6 819 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 TTLL11Q8NHH1 800 aa13.81□□□□□ -0.2
SLC13A3-201ENST00000279027 ZBTB43O43298 467 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 PFKFB2O60825 505 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 LRMPQ12912 555 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 UTP14AQ9BVJ6 771 aaKnown RBP13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 PDE8AO60658 829 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 NRBP1Q9UHY1 535 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 MFSD6Q6ZSS7 791 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 TRIM22Q8IYM9 498 aa13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 PIH1D3Q9NQM4 214 aaKnown RBP13.8□□□□□ -0.2
SLC13A3-201ENST00000279027 NFAT5O94916 1531 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 PRKAB2O43741 272 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 TTF1Q15361 905 aaPredicted RBP13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 CLSTN2Q9H4D0 955 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 RAD21O60216 631 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 FAM177A1Q8N128 213 aaPredicted RBP13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 SPTLC2O15270 562 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 SLC3A2P08195 630 aaKnown RBP13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 MST1RQ04912 1400 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 MRVI1Q9Y6F6 885 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
SLC13A3-201ENST00000279027 LTN1O94822 1766 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 PDE6AP16499 860 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 CLIC4Q9Y696 253 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 RESTQ13127 1097 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 HOMER1Q86YM7 354 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 PDE8BO95263 885 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 SERPINC1P01008 464 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 GYG1P46976 350 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 CASP7P55210 303 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 SDR42E1Q8WUS8 393 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 ISCA1Q9BUE6 129 aa13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
SLC13A3-201ENST00000279027 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.2
SLC13A3-201ENST00000279027 HS1BP3Q53T59 392 aa13.77□□□□□ -0.2
SLC13A3-201ENST00000279027 RGPD2P0DJD1 1756 aa13.77□□□□□ -0.2
SLC13A3-201ENST00000279027 CDKL5O76039 1030 aa13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 LMOD1P29536 600 aaPredicted RBP13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 STX1AQ16623 288 aa13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 SPATA5Q8NB90 893 aa13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 PYCARDQ9ULZ3 195 aa13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 KCNJ14Q9UNX9 436 aa13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 PUM3Q15397 648 aaKnown RBP13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 PTPN21Q16825 1174 aa13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 PDLIM2Q96JY6 352 aa13.77□□□□□ -0.21
SLC13A3-201ENST00000279027 SUSD4Q5VX71 490 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms