RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CCT6AP40227 531 aaKnown RBP12.55□□□□□ -0.4
CHFR-201ENST00000266880 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 TBC1D32Q96NH3 1257 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 HAUS7Q99871 368 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 STX17P56962 302 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 NAPGQ99747 312 aaPredicted RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 BAG1Q99933 345 aaPredicted RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 HHATQ5VTY9 493 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 SPAG1Q07617 926 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 TRIM31Q9BZY9 425 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 MAP3K12Q12852 859 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 PPP2R5CQ13362 524 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 KCNG4Q8TDN1 519 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 CCDC26Q8TAB7 109 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 DHX58Q96C10 678 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 UTP11Q9Y3A2 253 aaKnown RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 ITIH3Q06033 890 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
CHFR-201ENST00000266880 DNM1Q05193 864 aaKnown RBP12.54□□□□□ -0.4
CHFR-201ENST00000266880 TBC1D31Q96DN5 1066 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 CALR3Q96L12 384 aaKnown RBP12.53□□□□□ -0.4
CHFR-201ENST00000266880 PSMA7O14818 248 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 MTUS1Q9ULD2 1270 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 SLC5A1P13866 664 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 STAG1Q8WVM7 1258 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 USP6NLQ92738 828 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 RAB3IPQ96QF0 476 aaPredicted RBP12.53□□□□□ -0.4
CHFR-201ENST00000266880 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 DACT1Q9NYF0 836 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 DYTNA2CJ06 578 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 INPP1P49441 399 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 MYD88Q99836 296 aa12.53□□□□□ -0.4
CHFR-201ENST00000266880 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
CHFR-201ENST00000266880 TMED1Q13445 227 aa12.52□□□□□ -0.4
CHFR-201ENST00000266880 C8orf74Q6P047 294 aa12.52□□□□□ -0.4
CHFR-201ENST00000266880 ERBINQ96RT1 1412 aa12.52□□□□□ -0.4
CHFR-201ENST00000266880 RPAP2Q8IXW5 612 aaPredicted RBP12.52□□□□□ -0.4
CHFR-201ENST00000266880 ARHGAP42A6NI28 874 aa12.52□□□□□ -0.4
CHFR-201ENST00000266880 SSH1Q8WYL5 1049 aa12.52□□□□□ -0.4
CHFR-201ENST00000266880 LIG3P49916 1009 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 SLFN5Q08AF3 891 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
CHFR-201ENST00000266880 SEPT10Q9P0V9 454 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 SNCBQ16143 134 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 ZSCAN26Q16670 478 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 CAVIN4Q5BKX8 364 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 CUL4BQ13620 913 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 AFAP1L2Q8N4X5 818 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 TMX3Q96JJ7 454 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 KAT14Q9H8E8 782 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 EFCC1Q9HA90 598 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
CHFR-201ENST00000266880 HEATR3Q7Z4Q2 680 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
CHFR-201ENST00000266880 GAS8O95995 478 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 MFSD6Q6ZSS7 791 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 RRAGDQ9NQL2 400 aaPredicted RBP12.51□□□□□ -0.41
CHFR-201ENST00000266880 AKR1B15C9JRZ8 316 aaPredicted RBP12.51□□□□□ -0.41
CHFR-201ENST00000266880 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 IFT20Q8IY31 132 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 CLSTN2Q9H4D0 955 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 WDHD1O75717 1129 aaPredicted RBP12.51□□□□□ -0.41
CHFR-201ENST00000266880 PPP2R5DQ14738 602 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 LRRC23Q53EV4 343 aaPredicted RBP12.51□□□□□ -0.41
CHFR-201ENST00000266880 MCM10Q7L590 875 aa12.51□□□□□ -0.41
CHFR-201ENST00000266880 MX2P20592 715 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 CHMP2AO43633 222 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
CHFR-201ENST00000266880 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
CHFR-201ENST00000266880 PRPF31Q8WWY3 499 aaKnown RBP12.5□□□□□ -0.41
CHFR-201ENST00000266880 KIFC2Q96AC6 838 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 LUC7L3O95232 432 aaKnown RBP12.5□□□□□ -0.41
CHFR-201ENST00000266880 TUBBP07437 444 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 TDRD9Q8NDG6 1382 aaKnown RBP12.5□□□□□ -0.41
CHFR-201ENST00000266880 RNF8O76064 485 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 CEP104O60308 925 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 TMPOP42166 694 aaKnown RBP12.5□□□□□ -0.41
CHFR-201ENST00000266880 SPOPO43791 374 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 PLIN2Q99541 437 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 MYO10Q9HD67 2058 aa12.5□□□□□ -0.41
CHFR-201ENST00000266880 ARMC9Q7Z3E5 817 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms