RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 SNED1Q8TER0 1413 aa27.39■■□□□ 1.97
UFD1-201ENST00000263202 PDS5AQ29RF7 1337 aaKnown RBP27.38■■□□□ 1.97
UFD1-201ENST00000263202 LRRFIP1Q32MZ4 808 aaKnown RBP27.38■■□□□ 1.97
UFD1-201ENST00000263202 FRAT2O75474 233 aaPredicted RBP27.37■■□□□ 1.97
UFD1-201ENST00000263202 SLFNL1Q499Z3 407 aa27.37■■□□□ 1.97
UFD1-201ENST00000263202 TDRD7Q8NHU6 1098 aaKnown RBP27.37■■□□□ 1.97
UFD1-201ENST00000263202 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.37■■□□□ 1.978e-9■■■□□ 14.6
UFD1-201ENST00000263202 CD2APQ9Y5K6 639 aa27.37■■□□□ 1.97
UFD1-201ENST00000263202 ZFYP08048 801 aaPredicted RBP27.37■■□□□ 1.97
UFD1-201ENST00000263202 ZMYM1Q5SVZ6 1142 aa27.37■■□□□ 1.97
UFD1-201ENST00000263202 CC2D2BQ6DHV5 1058 aa27.37■■□□□ 1.97
UFD1-201ENST00000263202 ANO2Q9NQ90 1003 aa27.37■■□□□ 1.97
UFD1-201ENST00000263202 RBM25P49756 843 aaKnown RBP27.36■■□□□ 1.97
UFD1-201ENST00000263202 IDH1O75874 414 aaKnown RBP27.35■■□□□ 1.97
UFD1-201ENST00000263202 CD209Q9NNX6 404 aa27.35■■□□□ 1.97
UFD1-201ENST00000263202 PPP1R1BQ9UD71 204 aaPredicted RBP27.35■■□□□ 1.97
UFD1-201ENST00000263202 C21orf2O43822 256 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 WASHC4Q2M389 1173 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 ZSCAN25Q6NSZ9 544 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 SEC62Q99442 399 aaKnown RBP27.34■■□□□ 1.97
UFD1-201ENST00000263202 SPON1Q9HCB6 807 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 HELLSQ9NRZ9 838 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 PIM2Q9P1W9 311 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 CHD4Q14839 1912 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 IL1R1P14778 569 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 ADD2P35612 726 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 MCMDC2Q4G0Z9 681 aa27.34■■□□□ 1.97
UFD1-201ENST00000263202 RTFDC1Q9BY42 306 aaPredicted RBP27.34■■□□□ 1.97
UFD1-201ENST00000263202 RIMBP2O15034 1052 aa27.33■■□□□ 1.97
UFD1-201ENST00000263202 EPB41L2O43491 1005 aaKnown RBP27.33■■□□□ 1.97
UFD1-201ENST00000263202 SLC9C2Q5TAH2 1124 aa27.33■■□□□ 1.97
UFD1-201ENST00000263202 ZNF589Q86UQ0 364 aaPredicted RBP27.33■■□□□ 1.97
UFD1-201ENST00000263202 EYA3Q99504 573 aa27.33■■□□□ 1.97
UFD1-201ENST00000263202 ZC3H12CQ9C0D7 883 aaKnown RBP27.33■■□□□ 1.97
UFD1-201ENST00000263202 LSG1Q9H089 658 aaKnown RBP27.33■■□□□ 1.97
UFD1-201ENST00000263202 MAP3K12Q12852 859 aa27.32■■□□□ 1.96
UFD1-201ENST00000263202 KIAA1211Q6ZU35 1233 aa27.32■■□□□ 1.96
UFD1-201ENST00000263202 WWC3Q9ULE0 1092 aa27.32■■□□□ 1.96
UFD1-201ENST00000263202 CCDC88AQ3V6T2 1871 aa27.32■■□□□ 1.96
UFD1-201ENST00000263202 KLHL34Q8N239 644 aa27.32■■□□□ 1.96
UFD1-201ENST00000263202 PDE6AP16499 860 aa27.31■■□□□ 1.96
UFD1-201ENST00000263202 CHAF1AQ13111 956 aaPredicted RBP27.31■■□□□ 1.96
UFD1-201ENST00000263202 GRIPAP1Q4V328 841 aa27.31■■□□□ 1.96
UFD1-201ENST00000263202 APPBP2Q92624 585 aa27.31■■□□□ 1.96
UFD1-201ENST00000263202 OSBP2Q969R2 916 aa27.31■■□□□ 1.96
UFD1-201ENST00000263202 LRP2BPQ9P2M1 347 aa27.31■■□□□ 1.96
UFD1-201ENST00000263202 ABCF2Q9UG63 623 aa27.31■■□□□ 1.96
UFD1-201ENST00000263202 UBE3CQ15386 1083 aa27.3■■□□□ 1.96
UFD1-201ENST00000263202 COA1Q9GZY4 146 aa27.3■■□□□ 1.96
UFD1-201ENST00000263202 MAST3O60307 1309 aa27.3■■□□□ 1.96
UFD1-201ENST00000263202 TCRBV5S4A2TA0A5A2 114 aa27.3■■□□□ 1.96
UFD1-201ENST00000263202 PTH1RQ03431 593 aa27.3■■□□□ 1.96
UFD1-201ENST00000263202 CCDC93Q567U6 631 aa27.3■■□□□ 1.96
UFD1-201ENST00000263202 CCDC129Q6ZRS4 1044 aa27.3■■□□□ 1.96
UFD1-201ENST00000263202 MAST2Q6P0Q8 1798 aa27.29■■□□□ 1.96
UFD1-201ENST00000263202 CCDC171Q6TFL3 1326 aa27.29■■□□□ 1.96
UFD1-201ENST00000263202 ZNF532Q9HCE3 1301 aa27.29■■□□□ 1.96
UFD1-201ENST00000263202 M0R2C6 588 aa27.28■■□□□ 1.96
UFD1-201ENST00000263202 MAGEB6Q8N7X4 407 aa27.28■■□□□ 1.96
UFD1-201ENST00000263202 WDR66Q8TBY9 1149 aa27.28■■□□□ 1.96
UFD1-201ENST00000263202 JAG2Q9Y219 1238 aa27.28■■□□□ 1.96
UFD1-201ENST00000263202 SALL1Q9NSC2 1324 aa27.28■■□□□ 1.96
UFD1-201ENST00000263202 DALRD3Q5D0E6 543 aaKnown RBP27.27■■□□□ 1.96
UFD1-201ENST00000263202 RTKN2Q8IZC4 609 aa27.27■■□□□ 1.96
UFD1-201ENST00000263202 PUS7LQ9H0K6 701 aaKnown RBP27.27■■□□□ 1.96
UFD1-201ENST00000263202 SUPT20HQ8NEM7 779 aa27.27■■□□□ 1.96
UFD1-201ENST00000263202 ANP32AP39687 249 aaKnown RBP27.26■■□□□ 1.95
UFD1-201ENST00000263202 RAI14Q9P0K7 980 aa27.26■■□□□ 1.95
UFD1-201ENST00000263202 DOK7Q18PE1 504 aa27.25■■□□□ 1.95
UFD1-201ENST00000263202 SOGA3Q5TF21 947 aa27.25■■□□□ 1.95
UFD1-201ENST00000263202 MAP4K1Q92918 833 aa27.25■■□□□ 1.95
UFD1-201ENST00000263202 FER1L6Q2WGJ9 1857 aa27.25■■□□□ 1.95
UFD1-201ENST00000263202 ERICH6Q7L0X2 663 aa27.25■■□□□ 1.95
UFD1-201ENST00000263202 ZGPATQ8N5A5 531 aaKnown RBP27.25■■□□□ 1.95
UFD1-201ENST00000263202 PSMD1Q99460 953 aa27.25■■□□□ 1.95
UFD1-201ENST00000263202 KIF2CQ99661 725 aa27.25■■□□□ 1.95
UFD1-201ENST00000263202 FAM205AQ6ZU69 1335 aa27.24■■□□□ 1.95
UFD1-201ENST00000263202 MCCP23508 829 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 PRDX5P30044 214 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 HSPA4P34932 840 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 NLGN2Q8NFZ4 835 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 ARFGEF1Q9Y6D6 1849 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 G3V3G9 751 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 KIAA2012Q0VF49 1180 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 DCAF8Q5TAQ9 597 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 SPTY2D1Q68D10 685 aaPredicted RBP27.23■■□□□ 1.95
UFD1-201ENST00000263202 ZNF384Q8TF68 577 aa27.23■■□□□ 1.95
UFD1-201ENST00000263202 ZNF646O15015 1829 aaPredicted RBP27.22■■□□□ 1.95
UFD1-201ENST00000263202 AOC3Q16853 763 aa27.22■■□□□ 1.95
UFD1-201ENST00000263202 NSUN4Q96CB9 384 aaKnown RBP27.22■■□□□ 1.95
UFD1-201ENST00000263202 GPAA1O43292 621 aa27.21■■□□□ 1.95
UFD1-201ENST00000263202 MECOMQ03112 1051 aa27.21■■□□□ 1.95
UFD1-201ENST00000263202 DBNDD1Q9H9R9 158 aa27.21■■□□□ 1.95
UFD1-201ENST00000263202 RBM8AQ9Y5S9 174 aaKnown RBP27.21■■□□□ 1.95
UFD1-201ENST00000263202 SCN9AQ15858 1988 aa27.21■■□□□ 1.95
UFD1-201ENST00000263202 IGSF3O75054 1194 aa27.2■■□□□ 1.95
UFD1-201ENST00000263202 CYP7A1P22680 504 aa27.2■■□□□ 1.95
UFD1-201ENST00000263202 GTF2IP78347 998 aa27.2■■□□□ 1.95
UFD1-201ENST00000263202 VPS53Q5VIR6 699 aa27.2■■□□□ 1.95
UFD1-201ENST00000263202 PODNQ7Z5L7 613 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms