RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 RPS6KB1P23443 525 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 MRE11P49959 708 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 ME3Q16798 604 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 CCDC57Q2TAC2 916 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 MCMDC2Q4G0Z9 681 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 DALRD3Q5D0E6 543 aaKnown RBP21.08■□□□□ 0.97
SSB-201ENST00000260956 RNF20Q5VTR2 975 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 VGLL2Q8N8G2 317 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 NLRP3Q96P20 1036 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 LARP6Q9BRS8 491 aaKnown RBP21.08■□□□□ 0.97
SSB-201ENST00000260956 TPCN1Q9ULQ1 816 aa21.08■□□□□ 0.97
SSB-201ENST00000260956 PSMA5P28066 241 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 ADORA1P30542 326 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 CTSWP56202 376 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 ZNF445P59923 1031 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 TOB2Q14106 344 aaPredicted RBP21.07■□□□□ 0.96
SSB-201ENST00000260956 STYK1Q6J9G0 422 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 TTLL6Q8N841 843 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 HELLSQ9NRZ9 838 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 DLEC1Q9Y238 1755 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 TCHHQ07283 1943 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 GOLIM4O00461 696 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 NPR1P16066 1061 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 OLFM4Q6UX06 510 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 TMEM87AQ8NBN3 555 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 NEUROD6Q96NK8 337 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 CEP126Q9P2H0 1117 aa21.07■□□□□ 0.96
SSB-201ENST00000260956 U3KPZ7 1027 aaPredicted RBP21.07■□□□□ 0.96
SSB-201ENST00000260956 COL4A1P02462 1669 aa21.06■□□□□ 0.96
SSB-201ENST00000260956 HOXA10P31260 410 aaPredicted RBP21.06■□□□□ 0.96
SSB-201ENST00000260956 PANK2Q9BZ23 570 aa21.06■□□□□ 0.96
SSB-201ENST00000260956 GREM2Q9H772 168 aa21.06■□□□□ 0.96
SSB-201ENST00000260956 GRPEL1Q9HAV7 217 aa21.06■□□□□ 0.96
SSB-201ENST00000260956 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.06■□□□□ 0.96
SSB-201ENST00000260956 KCNJ4P48050 445 aa21.05■□□□□ 0.96
SSB-201ENST00000260956 C7orf43Q8WVR3 580 aa21.05■□□□□ 0.96
SSB-201ENST00000260956 ZNF219Q9P2Y4 722 aaPredicted RBP21.05■□□□□ 0.96
SSB-201ENST00000260956 SLX4Q8IY92 1834 aa21.05■□□□□ 0.96
SSB-201ENST00000260956 MAST3O60307 1309 aa21.05■□□□□ 0.96
SSB-201ENST00000260956 PRPF40AO75400 957 aaKnown RBP21.04■□□□□ 0.96
SSB-201ENST00000260956 SYT1P21579 422 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 IFIT5Q13325 482 aaKnown RBP21.04■□□□□ 0.96
SSB-201ENST00000260956 SLFNL1Q499Z3 407 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 FOXD4L5Q5VV16 416 aaPredicted RBP21.04■□□□□ 0.96
SSB-201ENST00000260956 BLOC1S2Q6QNY1 142 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 FOXD4L4Q8WXT5 416 aaPredicted RBP21.04■□□□□ 0.96
SSB-201ENST00000260956 XAGE2Q96GT9 111 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 DSCC1Q9BVC3 393 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 CYP21A2P08686 494 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 IFIT1P09914 478 aaKnown RBP21.04■□□□□ 0.96
SSB-201ENST00000260956 SCARF1Q14162 830 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 SF3B3Q15393 1217 aaKnown RBP21.04■□□□□ 0.96
SSB-201ENST00000260956 STOX1Q6ZVD7 989 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 CCDC83Q8IWF9 413 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 NSFL1CQ9UNZ2 370 aaKnown RBP21.04■□□□□ 0.96
SSB-201ENST00000260956 AKAP2Q9Y2D5 859 aa21.04■□□□□ 0.96
SSB-201ENST00000260956 FOXP2O15409 715 aa21.03■□□□□ 0.96
SSB-201ENST00000260956 C21orf2O43822 256 aa21.03■□□□□ 0.96
SSB-201ENST00000260956 ZSCAN22P10073 491 aaPredicted RBP21.03■□□□□ 0.96
SSB-201ENST00000260956 ITGA6P23229 1130 aa21.03■□□□□ 0.96
SSB-201ENST00000260956 KRT32Q14532 448 aa21.03■□□□□ 0.96
SSB-201ENST00000260956 CCDC85AQ96PX6 553 aaPredicted RBP21.03■□□□□ 0.96
SSB-201ENST00000260956 A0A1B0GUL6 1792 aa21.02■□□□□ 0.96
SSB-201ENST00000260956 DOCK2Q92608 1830 aa21.02■□□□□ 0.96
SSB-201ENST00000260956 RNF113AO15541 343 aaKnown RBP21.02■□□□□ 0.96
SSB-201ENST00000260956 RPGRQ92834 1020 aaKnown RBP21.02■□□□□ 0.96
SSB-201ENST00000260956 CNKSR1Q969H4 720 aa21.02■□□□□ 0.96
SSB-201ENST00000260956 ZNF512BQ96KM6 892 aaPredicted RBP21.02■□□□□ 0.96
SSB-201ENST00000260956 MTMR6Q9Y217 621 aa21.02■□□□□ 0.96
SSB-201ENST00000260956 STX6O43752 255 aa21.01■□□□□ 0.95
SSB-201ENST00000260956 PDE8AO60658 829 aa21.01■□□□□ 0.95
SSB-201ENST00000260956 ZSCAN23Q3MJ62 389 aa21.01■□□□□ 0.95
SSB-201ENST00000260956 SMC3Q9UQE7 1217 aa21.01■□□□□ 0.95
SSB-201ENST00000260956 MYO5AQ9Y4I1 1855 aaKnown RBP21.01■□□□□ 0.95
SSB-201ENST00000260956 ANKRD1Q15327 319 aa21.01■□□□□ 0.95
SSB-201ENST00000260956 CRAMP1Q96RY5 1269 aa21.01■□□□□ 0.95
SSB-201ENST00000260956 SEC31BQ9NQW1 1179 aa21.01■□□□□ 0.95
SSB-201ENST00000260956 TAF1P21675 1872 aa21■□□□□ 0.95
SSB-201ENST00000260956 RTL9Q8NET4 1388 aa21■□□□□ 0.95
SSB-201ENST00000260956 M0R2C6 588 aa21■□□□□ 0.95
SSB-201ENST00000260956 GJB2P29033 226 aa21■□□□□ 0.95
SSB-201ENST00000260956 PRELPP51888 382 aa21■□□□□ 0.95
SSB-201ENST00000260956 CAVIN1Q6NZI2 390 aaKnown RBP21■□□□□ 0.95
SSB-201ENST00000260956 NECAB1Q8N987 351 aa21■□□□□ 0.95
SSB-201ENST00000260956 TCEANC2Q96MN5 208 aa21■□□□□ 0.95
SSB-201ENST00000260956 TMEM63CQ9P1W3 806 aa21■□□□□ 0.95
SSB-201ENST00000260956 GRIN3BO60391 1043 aa20.99■□□□□ 0.95
SSB-201ENST00000260956 F13A1P00488 732 aa20.99■□□□□ 0.95
SSB-201ENST00000260956 ATP2B3Q16720 1220 aa20.99■□□□□ 0.95
SSB-201ENST00000260956 ARHGAP27Q6ZUM4 889 aa20.99■□□□□ 0.95
SSB-201ENST00000260956 CELF1Q92879 486 aaKnown RBP20.99■□□□□ 0.95
SSB-201ENST00000260956 RBM17Q96I25 401 aaKnown RBP20.99■□□□□ 0.95
SSB-201ENST00000260956 ANKRD18BA2A2Z9 1011 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 MBD3O95983 291 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 ALDH1B1P30837 517 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 OSBP2Q969R2 916 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 NEK1Q96PY6 1258 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 AGXT2Q9BYV1 514 aa20.98■□□□□ 0.95
SSB-201ENST00000260956 RBM27Q9P2N5 1060 aaKnown RBP20.98■□□□□ 0.95
SSB-201ENST00000260956 HSPD1P10809 573 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms