RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 USP17L4A6NCW7 530 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 VIL1P09327 827 aaKnown RBP17.26■□□□□ 0.35
VPS25-201ENST00000253794 MX1P20591 662 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 TNIP1Q15025 636 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 TTC39AQ5SRH9 613 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 DACT2Q5SW24 774 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 CIAPIN1Q6FI81 312 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 USP17L1Q7RTZ2 530 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
VPS25-201ENST00000253794 GPATCH3Q96I76 525 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 KCNQ5Q9NR82 932 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
VPS25-201ENST00000253794 ZNF541Q9H0D2 1346 aa17.25■□□□□ 0.35
VPS25-201ENST00000253794 IGSF3O75054 1194 aa17.25■□□□□ 0.35
VPS25-201ENST00000253794 MCAMP43121 646 aa17.25■□□□□ 0.35
VPS25-201ENST00000253794 GPC2Q8N158 579 aa17.25■□□□□ 0.35
VPS25-201ENST00000253794 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
VPS25-201ENST00000253794 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
VPS25-201ENST00000253794 MYO3BQ8WXR4 1341 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 PSMD14O00487 310 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 PDE4AP27815 886 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 PDE1AP54750 535 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 GTF2IP78347 998 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 SCARF1Q14162 830 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 TTLL5Q6EMB2 1281 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 PLEKHM2Q8IWE5 1019 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 SPATA5Q8NB90 893 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 TBC1D22AQ8WUA7 517 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 GMLQ99445 158 aa17.24■□□□□ 0.35
VPS25-201ENST00000253794 RAD17O75943 681 aa17.23■□□□□ 0.35
VPS25-201ENST00000253794 RPS12P25398 132 aaKnown RBP17.23■□□□□ 0.35
VPS25-201ENST00000253794 MMP14P50281 582 aa17.23■□□□□ 0.35
VPS25-201ENST00000253794 RSBN1LQ6PCB5 846 aaPredicted RBP17.23■□□□□ 0.35
VPS25-201ENST00000253794 AGBL3Q8NEM8 1001 aa17.23■□□□□ 0.35
VPS25-201ENST00000253794 IQSEC3Q9UPP2 1182 aaPredicted RBP17.23■□□□□ 0.35
VPS25-201ENST00000253794 SUGT1Q9Y2Z0 365 aa17.23■□□□□ 0.35
VPS25-201ENST00000253794 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
VPS25-201ENST00000253794 GLTPD2A6NH11 291 aa17.22■□□□□ 0.35
VPS25-201ENST00000253794 ERC2O15083 957 aa17.22■□□□□ 0.35
VPS25-201ENST00000253794 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
VPS25-201ENST00000253794 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
VPS25-201ENST00000253794 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
VPS25-201ENST00000253794 DPF2Q92785 391 aa17.22■□□□□ 0.35
VPS25-201ENST00000253794 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
VPS25-201ENST00000253794 HAUS7Q99871 368 aa17.22■□□□□ 0.35
VPS25-201ENST00000253794 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
VPS25-201ENST00000253794 PI16Q6UXB8 463 aa17.21■□□□□ 0.35
VPS25-201ENST00000253794 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
VPS25-201ENST00000253794 CYP2E1P05181 493 aaPredicted RBP17.2■□□□□ 0.34
VPS25-201ENST00000253794 ZAP70P43403 619 aa17.2■□□□□ 0.34
VPS25-201ENST00000253794 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
VPS25-201ENST00000253794 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
VPS25-201ENST00000253794 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
VPS25-201ENST00000253794 TMED8Q6PL24 325 aaPredicted RBP17.19■□□□□ 0.34
VPS25-201ENST00000253794 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
VPS25-201ENST00000253794 DDNO94850 711 aaPredicted RBP17.18■□□□□ 0.34
VPS25-201ENST00000253794 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
VPS25-201ENST00000253794 SCNN1DP51172 638 aa17.18■□□□□ 0.34
VPS25-201ENST00000253794 TTF1Q15361 905 aaPredicted RBP17.18■□□□□ 0.34
VPS25-201ENST00000253794 TSHZ3Q63HK5 1081 aa17.18■□□□□ 0.34
VPS25-201ENST00000253794 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
VPS25-201ENST00000253794 MRIQ9BWK5 157 aa17.18■□□□□ 0.34
VPS25-201ENST00000253794 BOLA2Q9H3K6 86 aa17.18■□□□□ 0.34
VPS25-201ENST00000253794 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
VPS25-201ENST00000253794 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
VPS25-201ENST00000253794 ZNF280AP59817 542 aaPredicted RBP17.17■□□□□ 0.34
VPS25-201ENST00000253794 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
VPS25-201ENST00000253794 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
VPS25-201ENST00000253794 MXD3Q9BW11 206 aa17.17■□□□□ 0.34
VPS25-201ENST00000253794 BCL11AQ9H165 835 aa17.17■□□□□ 0.34
VPS25-201ENST00000253794 PAG1Q9NWQ8 432 aa17.17■□□□□ 0.34
VPS25-201ENST00000253794 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
VPS25-201ENST00000253794 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
VPS25-201ENST00000253794 MAST3O60307 1309 aa17.17■□□□□ 0.34
VPS25-201ENST00000253794 PRDX5P30044 214 aa17.16■□□□□ 0.34
VPS25-201ENST00000253794 GRIK5Q16478 980 aa17.16■□□□□ 0.34
VPS25-201ENST00000253794 FBXW7Q969H0 707 aa17.16■□□□□ 0.34
VPS25-201ENST00000253794 PIH1D3Q9NQM4 214 aaKnown RBP17.16■□□□□ 0.34
VPS25-201ENST00000253794 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
VPS25-201ENST00000253794 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
VPS25-201ENST00000253794 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
VPS25-201ENST00000253794 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
VPS25-201ENST00000253794 USP17L8P0C7I0 530 aa17.15■□□□□ 0.34
VPS25-201ENST00000253794 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
VPS25-201ENST00000253794 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
VPS25-201ENST00000253794 ANTXR1Q9H6X2 564 aa17.15■□□□□ 0.34
VPS25-201ENST00000253794 NDUFB9Q9Y6M9 179 aa17.15■□□□□ 0.34
VPS25-201ENST00000253794 SCN4AP35499 1836 aa17.14■□□□□ 0.34
VPS25-201ENST00000253794 GOLIM4O00461 696 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 TTC22Q5TAA0 569 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 TBC1D9Q6ZT07 1266 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 NSUN4Q96CB9 384 aaKnown RBP17.14■□□□□ 0.33
VPS25-201ENST00000253794 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
VPS25-201ENST00000253794 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms