RNA–Protein interactions for RNA: ENST00000242839.8

ATP7B-201, Transcript of ATPase copper transporting beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP7B, Length 6,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-201ENST00000242839 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 DYNC1I1O14576 645 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 ALDH1L2Q3SY69 923 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 CCDC14Q49A88 953 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 KIAA1107Q9UPP5 1409 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 PSMA7O14818 248 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
ATP7B-201ENST00000242839 XAGE3Q8WTP9 111 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
ATP7B-201ENST00000242839 CLGNO14967 610 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 ZSCAN22P10073 491 aaPredicted RBP12.74□□□□□ -0.37
ATP7B-201ENST00000242839 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
ATP7B-201ENST00000242839 APOBRQ0VD83 1088 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 RTL1A6NKG5 1358 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 CEP85LQ5SZL2 805 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 CPLX4Q7Z7G2 160 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 LEO1Q8WVC0 666 aaPredicted RBP12.74□□□□□ -0.37
ATP7B-201ENST00000242839 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
ATP7B-201ENST00000242839 MYCLP12524 364 aaPredicted RBP12.74□□□□□ -0.37
ATP7B-201ENST00000242839 VPS52Q8N1B4 723 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
ATP7B-201ENST00000242839 ATP2A2P16615 1042 aaKnown RBP12.74□□□□□ -0.37
ATP7B-201ENST00000242839 KIF5AQ12840 1032 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 KMT5BQ4FZB7 885 aa12.74□□□□□ -0.37
ATP7B-201ENST00000242839 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 TTC22Q5TAA0 569 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 FMNL3Q8IVF7 1028 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 NLRP3Q96P20 1036 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 AFG3L2Q9Y4W6 797 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 USTQ9Y2C2 406 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 RBM8AQ9Y5S9 174 aaKnown RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 POLD1P28340 1107 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 PRPHP41219 470 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 CCDC186Q7Z3E2 898 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 OPA1O60313 960 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 HPDP32754 393 aaPredicted RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 JDP2Q8WYK2 163 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 ZNF174Q15697 407 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 LMBR1Q8WVP7 490 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 TMX3Q96JJ7 454 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 FNBP1Q96RU3 617 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
ATP7B-201ENST00000242839 FAM204AQ9H8W3 233 aa12.73□□□□□ -0.37
ATP7B-201ENST00000242839 PTPRCP08575 1304 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 VIMP08670 466 aaKnown RBP12.72□□□□□ -0.37
ATP7B-201ENST00000242839 SEL1L2Q5TEA6 688 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 KSR1Q8IVT5 923 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 CCDC42Q96M95 316 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 CCDC171Q6TFL3 1326 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
ATP7B-201ENST00000242839 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 MSANTD4Q8NCY6 345 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 IGSF3O75054 1194 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 MCMDC2Q4G0Z9 681 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 LRRC43Q8N309 656 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 ARFGAP3Q9NP61 516 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 PAXBP1Q9Y5B6 917 aa12.72□□□□□ -0.37
ATP7B-201ENST00000242839 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 CAPN2P17655 700 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 INF2Q27J81 1249 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 WDR44Q5JSH3 913 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
ATP7B-201ENST00000242839 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 CIB2O75838 187 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.37
ATP7B-201ENST00000242839 SEPT6Q14141 434 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 LETM2Q2VYF4 491 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 CCDC170Q8IYT3 715 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 MRPS27Q92552 414 aaKnown RBP12.71□□□□□ -0.37
ATP7B-201ENST00000242839 CNNM2Q9H8M5 875 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 MAPK8IP1Q9UQF2 711 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 FRMD4BQ9Y2L6 1034 aa12.71□□□□□ -0.37
ATP7B-201ENST00000242839 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
ATP7B-201ENST00000242839 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
ATP7B-201ENST00000242839 ZC3H12CQ9C0D7 883 aaKnown RBP12.71□□□□□ -0.37
ATP7B-201ENST00000242839 PIK3R4Q99570 1358 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 CCNT1O60563 726 aaKnown RBP12.71□□□□□ -0.38
ATP7B-201ENST00000242839 LONRF3Q496Y0 759 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 DACT1Q9NYF0 836 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 KRT19P08727 400 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 KIAA1524Q8TCG1 905 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 GOLGA1Q92805 767 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 TRIM31Q9BZY9 425 aa12.71□□□□□ -0.38
ATP7B-201ENST00000242839 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms