RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CEP57L1Q8IYX8 460 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
SF1-201ENST00000227503 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
SF1-201ENST00000227503 ME1P48163 572 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 CCDC73Q6ZRK6 1079 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 HMG20BQ9P0W2 317 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 COL15A1P39059 1388 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
SF1-201ENST00000227503 TADA3O75528 432 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 PHKG2P15735 406 aa16.36■□□□□ 0.21
SF1-201ENST00000227503 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
SF1-201ENST00000227503 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
SF1-201ENST00000227503 SCN11AQ9UI33 1791 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 MST1RQ04912 1400 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 ATP1A3P13637 1013 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 ATP5JP18859 108 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 TSPYL1Q9H0U9 437 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 H3BQF6 201 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
SF1-201ENST00000227503 ZC3H6P61129 1189 aaKnown RBP16.35■□□□□ 0.21
SF1-201ENST00000227503 ETF1P62495 437 aaKnown RBP16.35■□□□□ 0.21
SF1-201ENST00000227503 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
SF1-201ENST00000227503 HSP90AA4PQ58FG1 418 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 SDF4Q9BRK5 362 aa16.35■□□□□ 0.21
SF1-201ENST00000227503 KIF2AO00139 706 aaPredicted RBP16.34■□□□□ 0.21
SF1-201ENST00000227503 NOP2P46087 812 aaKnown RBP16.34■□□□□ 0.21
SF1-201ENST00000227503 GSDMDP57764 484 aa16.34■□□□□ 0.21
SF1-201ENST00000227503 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
SF1-201ENST00000227503 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
SF1-201ENST00000227503 TNNI3KQ59H18 835 aa16.34■□□□□ 0.21
SF1-201ENST00000227503 CC2D1AQ6P1N0 951 aaPredicted RBP16.34■□□□□ 0.21
SF1-201ENST00000227503 TRIM65Q6PJ69 517 aa16.34■□□□□ 0.21
SF1-201ENST00000227503 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
SF1-201ENST00000227503 FPGT-TNNI3KV9GXZ4 949 aa16.34■□□□□ 0.21
SF1-201ENST00000227503 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.21
SF1-201ENST00000227503 TFCP2Q12800 502 aa16.33■□□□□ 0.21
SF1-201ENST00000227503 RABL6Q3YEC7 729 aaPredicted RBP16.33■□□□□ 0.21
SF1-201ENST00000227503 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.21
SF1-201ENST00000227503 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.2
SF1-201ENST00000227503 Q6ZUG5 572 aa16.33■□□□□ 0.2
SF1-201ENST00000227503 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.2
SF1-201ENST00000227503 RRP15Q9Y3B9 282 aaKnown RBP16.33■□□□□ 0.2
SF1-201ENST00000227503 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 MUM1L1Q5H9M0 696 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 DPF2Q92785 391 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 ADAM21Q9UKJ8 722 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 MEGF6O75095 1541 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 CAVIN2O95810 425 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
SF1-201ENST00000227503 NCOA5Q9HCD5 579 aaKnown RBP16.32■□□□□ 0.2
SF1-201ENST00000227503 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 C1orf167Q5SNV9 1468 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
SF1-201ENST00000227503 FAM193AP78312 1265 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 SCRN1Q12765 414 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 OTUD7BQ6GQQ9 843 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 WDR24Q96S15 920 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 ATG3Q9NT62 314 aa16.32■□□□□ 0.2
SF1-201ENST00000227503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.21e-10■■■□□ 15.6
SF1-201ENST00000227503 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
SF1-201ENST00000227503 CASQ1P31415 396 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 KRT32Q14532 448 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 SRLQ86TD4 932 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 RFX7Q2KHR2 1363 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 ZNF609O15014 1411 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 PSDA5PKW4 1024 aaPredicted RBP16.31■□□□□ 0.2
SF1-201ENST00000227503 UBE3BQ7Z3V4 1068 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 UBXN6Q9BZV1 441 aa16.31■□□□□ 0.2
SF1-201ENST00000227503 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 LOC102724159A0A0B4J2E5 919 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 NDUFA8P51970 172 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 FAM160A1Q05DH4 1040 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 PWP2Q15269 919 aaKnown RBP16.3■□□□□ 0.2
SF1-201ENST00000227503 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 CCDC9Q9Y3X0 531 aaKnown RBP16.3■□□□□ 0.2
SF1-201ENST00000227503 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
SF1-201ENST00000227503 CASP7P55210 303 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 GPS2Q13227 327 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 MCM6Q14566 821 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
SF1-201ENST00000227503 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
SF1-201ENST00000227503 N4BP1O75113 896 aaKnown RBP16.29■□□□□ 0.2
SF1-201ENST00000227503 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
SF1-201ENST00000227503 HAUS7Q99871 368 aa16.29■□□□□ 0.2
SF1-201ENST00000227503 KCND1Q9NSA2 647 aa16.29■□□□□ 0.2
SF1-201ENST00000227503 VPS18Q9P253 973 aa16.29■□□□□ 0.2
SF1-201ENST00000227503 CTAGE5O15320 804 aa16.28■□□□□ 0.2
SF1-201ENST00000227503 CYP27B1O15528 508 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms