RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CLSTN1O94985 981 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 CCDC192P0DO97 292 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 CUL4AQ13619 759 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 C11orf91Q3C1V1 193 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 FAM200AQ8TCP9 573 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 GPATCH3Q96I76 525 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
GABPB1-201ENST00000220429 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
GABPB1-201ENST00000220429 L2HGDHQ9H9P8 463 aa15.81■□□□□ 0.12
GABPB1-201ENST00000220429 CCDC8Q9H0W5 538 aaPredicted RBP15.8■□□□□ 0.12
GABPB1-201ENST00000220429 TLR7Q9NYK1 1049 aaKnown RBP15.8■□□□□ 0.12
GABPB1-201ENST00000220429 SNX14Q9Y5W7 946 aa15.8■□□□□ 0.12
GABPB1-201ENST00000220429 ZNF75DP51815 510 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 NBPF26B4DH59 902 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 ATP5J2-PTCD1G3V325 749 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 PTCD1O75127 700 aaKnown RBP15.79■□□□□ 0.12
GABPB1-201ENST00000220429 ZRSR1Q15695 479 aaKnown RBP15.79■□□□□ 0.12
GABPB1-201ENST00000220429 NBPF14Q5TI25 921 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 PLA2G4DQ86XP0 818 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 RASEFQ8IZ41 740 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 NBPF15Q8N660 670 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 TBC1D22AQ8WUA7 517 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
GABPB1-201ENST00000220429 WDR33Q9C0J8 1336 aaKnown RBP15.79■□□□□ 0.12
GABPB1-201ENST00000220429 PAPPAQ13219 1627 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 KLHL33A6NCF5 533 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 SEC31AO94979 1220 aaKnown RBP15.78■□□□□ 0.12
GABPB1-201ENST00000220429 EFCAB13Q8IY85 973 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 LRRN4CLQ8ND94 238 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 EVI5LQ96CN4 794 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 BSDC1Q9NW68 430 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-201ENST00000220429 SASH3O75995 380 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 ZKSCAN8Q15776 578 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-201ENST00000220429 UBE3BQ7Z3V4 1068 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 PLBD2Q8NHP8 589 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 INTS4Q96HW7 963 aaKnown RBP15.78■□□□□ 0.12
GABPB1-201ENST00000220429 CNPY2Q9Y2B0 182 aa15.78■□□□□ 0.12
GABPB1-201ENST00000220429 KCPQ6ZWJ8 1503 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 ERVV-2B6SEH9 535 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 RPS6KA5O75582 802 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 RFX5P48382 616 aaPredicted RBP15.77■□□□□ 0.12
GABPB1-201ENST00000220429 MNAT1P51948 309 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 LUZP1Q86V48 1076 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 COPRSQ9NQ92 184 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 ORC3Q9UBD5 711 aaPredicted RBP15.77■□□□□ 0.12
GABPB1-201ENST00000220429 CLIP2Q9UDT6 1046 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.12
GABPB1-201ENST00000220429 TBC1D8O95759 1140 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 TPM1P09493 284 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 IL2RBP14784 551 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 SCP2P22307 547 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 NKX1-1Q15270 411 aaPredicted RBP15.77■□□□□ 0.11
GABPB1-201ENST00000220429 FOXR1Q6PIV2 292 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 LRRC8AQ8IWT6 810 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 RUFY2Q8WXA3 655 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 COL15A1P39059 1388 aa15.77■□□□□ 0.11
GABPB1-201ENST00000220429 H0YHG0 523 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 SMC2O95347 1197 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 CASP7P55210 303 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 SARNPP82979 210 aaKnown RBP15.76■□□□□ 0.11
GABPB1-201ENST00000220429 PTH1RQ03431 593 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 CCDC144BQ3MJ40 725 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 RABL6Q3YEC7 729 aaPredicted RBP15.76■□□□□ 0.11
GABPB1-201ENST00000220429 CCDC144CPQ8IYA2 1237 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 TRMT1Q9NXH9 659 aaKnown RBP15.76■□□□□ 0.11
GABPB1-201ENST00000220429 A0A087WZG4 1122 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 TTC36A6NLP5 189 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 NEMFO60524 1076 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 PTPN12Q05209 780 aaKnown RBP15.76■□□□□ 0.11
GABPB1-201ENST00000220429 CCDC93Q567U6 631 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 TTLL5Q6EMB2 1281 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 UBXN4Q92575 508 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 CCDC34Q96HJ3 373 aa15.76■□□□□ 0.11
GABPB1-201ENST00000220429 KDM4FA0A1W2PPD8 638 aa15.75■□□□□ 0.11
GABPB1-201ENST00000220429 TADA2BQ86TJ2 420 aa15.75■□□□□ 0.11
GABPB1-201ENST00000220429 TTC14Q96N46 770 aa15.75■□□□□ 0.11
GABPB1-201ENST00000220429 STRN4Q9NRL3 753 aa15.75■□□□□ 0.11
GABPB1-201ENST00000220429 NHSL1Q5SYE7 1610 aa15.75■□□□□ 0.11
GABPB1-201ENST00000220429 TTLL7Q6ZT98 887 aa15.75■□□□□ 0.11
GABPB1-201ENST00000220429 CCAR2Q8N163 923 aaKnown RBP15.75■□□□□ 0.11
GABPB1-201ENST00000220429 RPAP1Q9BWH6 1393 aaPredicted RBP15.75■□□□□ 0.11
GABPB1-201ENST00000220429 BOLA2Q9H3K6 86 aa15.75■□□□□ 0.11
GABPB1-201ENST00000220429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.75■□□□□ 0.115e-6■■■■□ 23.6
GABPB1-201ENST00000220429 ANKRD65E5RJM6 399 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 SKILP12757 684 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 LIG1P18858 919 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 NBPF5PQ86XG9 351 aaPredicted RBP15.74■□□□□ 0.11
GABPB1-201ENST00000220429 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
GABPB1-201ENST00000220429 BORCS6Q96GS4 357 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 MKRN1Q9UHC7 482 aaKnown RBP15.74■□□□□ 0.11
GABPB1-201ENST00000220429 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
GABPB1-201ENST00000220429 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 TJP1Q07157 1748 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 A1BGP04217 495 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 FAM227BQ96M60 508 aa15.74■□□□□ 0.11
GABPB1-201ENST00000220429 A0A087WUV0 522 aaPredicted RBP15.73■□□□□ 0.11
GABPB1-201ENST00000220429 NMIQ13287 307 aaPredicted RBP15.73■□□□□ 0.11
GABPB1-201ENST00000220429 TACO1Q9BSH4 297 aaKnown RBP15.73■□□□□ 0.11
GABPB1-201ENST00000220429 MPHOSPH10O00566 681 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms