RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 EIF3CLB5ME19 914 aaKnown RBP17.3■□□□□ 0.36
PDZD4-201ENST00000164640 PFKFB1P16118 471 aa17.3■□□□□ 0.36
PDZD4-201ENST00000164640 EIF3CQ99613 913 aaKnown RBP17.3■□□□□ 0.36
PDZD4-201ENST00000164640 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
PDZD4-201ENST00000164640 GOLGA6L9A6NEM1 432 aa17.3■□□□□ 0.36
PDZD4-201ENST00000164640 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
PDZD4-201ENST00000164640 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
PDZD4-201ENST00000164640 SASH1O94885 1247 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 FUT8Q9BYC5 575 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 ENGASEQ8NFI3 743 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 TRIM65Q6PJ69 517 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 SMARCC1Q92922 1105 aaPredicted RBP17.29■□□□□ 0.36
PDZD4-201ENST00000164640 HINFPQ9BQA5 517 aa17.29■□□□□ 0.36
PDZD4-201ENST00000164640 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
PDZD4-201ENST00000164640 CCDC175P0C221 793 aa17.28■□□□□ 0.36
PDZD4-201ENST00000164640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.28■□□□□ 0.36
PDZD4-201ENST00000164640 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
PDZD4-201ENST00000164640 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
PDZD4-201ENST00000164640 RALYLQ86SE5 291 aaKnown RBP17.28■□□□□ 0.36
PDZD4-201ENST00000164640 RGS22Q8NE09 1264 aa17.28■□□□□ 0.36
PDZD4-201ENST00000164640 PPM1EQ8WY54 764 aa17.28■□□□□ 0.36
PDZD4-201ENST00000164640 GPHNQ9NQX3 736 aaPredicted RBP17.28■□□□□ 0.36
PDZD4-201ENST00000164640 ABCB6Q9NP58 842 aa17.28■□□□□ 0.36
PDZD4-201ENST00000164640 DBF4Q9UBU7 674 aaPredicted RBP17.28■□□□□ 0.36
PDZD4-201ENST00000164640 GRM8O00222 908 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 HMGB1P09429 215 aaKnown RBP17.27■□□□□ 0.36
PDZD4-201ENST00000164640 ZNF827Q17R98 1081 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 REXO1L1PQ8IX06 675 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 CCDC151A5D8V7 595 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 PFKFB2O60825 505 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 RXRAP19793 462 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 PSME1Q06323 249 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
PDZD4-201ENST00000164640 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.35
PDZD4-201ENST00000164640 TRIM29Q14134 588 aa17.27■□□□□ 0.35
PDZD4-201ENST00000164640 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.35
PDZD4-201ENST00000164640 FAM204AQ9H8W3 233 aa17.27■□□□□ 0.35
PDZD4-201ENST00000164640 LIG3P49916 1009 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 MTF1Q14872 753 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 LLPHQ9BRT6 129 aaKnown RBP17.26■□□□□ 0.35
PDZD4-201ENST00000164640 PPLO60437 1756 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 CTAGE15A4D2H0 777 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 CTAGE8P0CG41 777 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
PDZD4-201ENST00000164640 STX17P56962 302 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 SETQ01105 290 aaPredicted RBP17.26■□□□□ 0.35
PDZD4-201ENST00000164640 BRD3Q15059 726 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 CTAGE6Q86UF2 777 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 CTAGE4Q8IX94 777 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 JMYQ8N9B5 988 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 MYCBPQ99417 103 aaPredicted RBP17.26■□□□□ 0.35
PDZD4-201ENST00000164640 MAGEA9P43362 315 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 DNAJC21Q5F1R6 531 aaKnown RBP17.26■□□□□ 0.35
PDZD4-201ENST00000164640 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 MRFAP1Q9Y605 127 aa17.26■□□□□ 0.35
PDZD4-201ENST00000164640 FKBP4Q02790 459 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDZD4-201ENST00000164640 ANO1Q5XXA6 986 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 ZNF530Q6P9A1 599 aaPredicted RBP17.25■□□□□ 0.35
PDZD4-201ENST00000164640 PACS2Q86VP3 889 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 CAGE1Q8TC20 777 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 CLIC6Q96NY7 704 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 NFE2L3Q9Y4A8 694 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 TFCP2Q12800 502 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 CEP112Q8N8E3 955 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 TFRCP02786 760 aaKnown RBP17.25■□□□□ 0.35
PDZD4-201ENST00000164640 PIP4K2AP48426 406 aaPredicted RBP17.25■□□□□ 0.35
PDZD4-201ENST00000164640 MAP3K9P80192 1104 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 PROSER3Q2NL68 480 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 MYSM1Q5VVJ2 828 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 VSTM4Q8IW00 320 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 CRACR2AQ9BSW2 395 aa17.25■□□□□ 0.35
PDZD4-201ENST00000164640 CTAGE9A4FU28 777 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 SOWAHDA6NJG2 315 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 NOP2P46087 812 aaKnown RBP17.24■□□□□ 0.35
PDZD4-201ENST00000164640 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
PDZD4-201ENST00000164640 ABTB2Q8N961 1025 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 HSP90AB3PQ58FF7 597 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 ATL3Q6DD88 541 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 CCDC82Q8N4S0 544 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 KCNB2Q92953 911 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 ARHGEF10O15013 1369 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 ADCY9O60503 1353 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 PRR36Q9H6K5 1346 aa17.24■□□□□ 0.35
PDZD4-201ENST00000164640 CTDNEP1O95476 244 aa17.23■□□□□ 0.35
PDZD4-201ENST00000164640 PDIA3P30101 505 aaKnown RBP17.23■□□□□ 0.35
PDZD4-201ENST00000164640 TRDNQ13061 729 aa17.23■□□□□ 0.35
PDZD4-201ENST00000164640 MYD88Q99836 296 aa17.23■□□□□ 0.35
PDZD4-201ENST00000164640 SPECC1LQ69YQ0 1117 aa17.23■□□□□ 0.35
PDZD4-201ENST00000164640 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms