RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 Itga6Q61739 1091 aa17.33■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Cyp7a1Q64505 503 aa17.33■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Cdca8Q8BHX3 289 aa17.33■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Mknk2Q8CDB0 459 aa17.33■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Cfap99A0A140LIX9 648 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Prr5lA2AVJ5 370 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Brpf3B2KF05 1204 aaKnown RBP17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Hmx1O70218 332 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Exoc5Q3TPX4 708 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Il17raQ60943 864 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Ccdc82Q6PG04 518 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Ubxn4Q8VCH8 506 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Kat6bQ8BRB7 1872 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Wdr19Q3UGF1 1341 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Sall1Q9ER74 1322 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Pde8bE9Q4S1 865 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Tmem109Q3UBX0 243 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 ErmnQ5EBJ4 281 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Slc38a10Q5I012 1090 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Gpatch3Q8BIY1 525 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Srek1Q8BZX4 494 aaKnown RBP17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Plcd3Q8K2J0 785 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Ginm1Q91WR6 327 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Rapgef4Q9EQZ6 1011 aa17.32■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 NcapgE9PWG6 1004 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Prl3d1P18121 224 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Kif3aP28741 701 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Hook1Q8BIL5 728 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Fsd2Q8BZ52 692 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Terf2ipQ91VL8 393 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Ccer1Q9CQL2 403 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Odf2lQ9D478 642 aa17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 CrebrfQ8CDG5 640 aaKnown RBP17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Nop14Q8R3N1 860 aaKnown RBP17.31■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Cfap44E9Q5M6 1843 aa17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Pdia4P08003 638 aaKnown RBP17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Plbd2Q3TCN2 594 aa17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 U2af1l4Q8BGJ9 220 aa17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Alx1Q8C8B0 326 aa17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Cnot6lQ8VEG6 555 aa17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Col4a3bpQ9EQG9 624 aa17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Osbpl5Q9ER64 874 aa17.3■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Pcdhb9E9Q5G2 828 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Oxsr1Q6P9R2 527 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Pcdhb22Q91XZ8 794 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Cdc45Q9Z1X9 566 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Fer1l6E0CZ42 1862 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Ankrd23Q812A3 306 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Fbxo3Q9DC63 480 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Plekho1Q9JIY0 408 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Setdb1O88974 1307 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 4931408C20RikE9PWP9 1381 aa17.29■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Clec11aO88200 328 aa17.28■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Cep63Q3UPP8 700 aa17.28■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Susd4Q8BH32 490 aa17.28■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Aox4Q3TYQ9 1336 aa17.28■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Rrp1P56183 494 aaKnown RBP17.27■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Acap3Q6NXL5 833 aa17.27■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Tpcn2Q8BWC0 731 aa17.27■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Snw1Q9CSN1 536 aaKnown RBP17.27■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Naa16Q9DBB4 864 aa17.27■□□□□ 0.36
Cpsf6-207ENSMUST00000176686 Nucb2P81117 420 aa17.27■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Eno4Q8C042 619 aa17.27■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 FAM186AQ9D9R9 1790 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Cyp3a59D3Z2W7 503 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Esco1Q69Z69 843 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Kiaa0753Q6A000 959 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Abtb2Q7TQI7 1024 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 SdsQ8VBT2 327 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Trim34aQ99PP6 485 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Tbc1d7Q9D0K0 293 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Zbtb43Q9DAI4 467 aa17.26■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Speer4dL7N216 212 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Stx1aO35526 288 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Kcnf1Q7TSH7 493 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Pcdhb15Q91Y04 786 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Mast3Q3U214 1321 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Snrpa1P57784 255 aaKnown RBP17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Atp1a3Q6PIC6 1013 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Miga2Q8BK03 593 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Rbm10Q99KG3 930 aaKnown RBP17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Ripk4Q9ERK0 786 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Ubn2Q80WC1 1314 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Lama4P97927 1816 aa17.25■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Myh2G3UW82 1942 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Gm4340L7N2C4 268 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Slf2Q6P9P0 1278 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Hnrnpul1Q8VDM6 859 aaKnown RBP17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Stk38Q91VJ4 465 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Ccdc47Q9D024 483 aaKnown RBP17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Lipo1J3QME6 396 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Dctn1O08788 1281 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Nme8Q715T0 586 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Krt84Q99M73 603 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Telo2Q9DC40 840 aaKnown RBP17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Mroh6V9GX81 722 aa17.24■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Znfx1Q8R151 1909 aaKnown RBP17.23■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Gm20425E9Q035 978 aaKnown RBP17.23■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 Gm973E9Q295 1059 aa17.23■□□□□ 0.35
Cpsf6-207ENSMUST00000176686 SrprbP47758 269 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms