RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 A0A1W2PRD5 423 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 A0A1W2PRF3 423 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 A0A1W2PRM7 423 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 OR6C68A6NDL8 312 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 M0R135 149 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 NPFFO15130 113 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 FCN3O75636 299 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 PTBP3O95758 552 aaKnown RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 SERPINA3P01011 423 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 TALDO1P37837 337 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 RPS7P62081 194 aaKnown RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 ZNF92Q03936 586 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 PRB3Q04118 309 aaPredicted RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 MZT1Q08AG7 82 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 CCDC58Q4VC31 144 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SLC35D3Q5M8T2 416 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 THOC7Q6I9Y2 204 aaKnown RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 SLC18B1Q6NT16 456 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SLC35F2Q8IXU6 374 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 OR6V1Q8N148 313 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 GCSAMQ8N6F7 178 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SPERTQ8NA61 448 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 OR11H7Q8NGC8 314 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 OR2AE1Q8NHA4 323 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 PPP1R14AQ96A00 147 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 ZNF799Q96GE5 643 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 MAP6Q96JE9 813 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 CNN2Q99439 309 aaKnown RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.41□□□□□ -1.385e-7■□□□□ 10.8
CLK1-215ENST00000621181 ING3Q9NXR8 418 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 MRPL15Q9P015 296 aaKnown RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 KAAG1Q9UBP8 84 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 FBLN5Q9UBX5 448 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SPATA2Q9UM82 520 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 NUBP2Q9Y5Y2 271 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 RNASEK-C17orf49H0YIS7 233 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 RENP00797 406 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 TCRBP04435 133 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SPI1P17947 270 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SAA4P35542 130 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 GBX2P52951 348 aaPredicted RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 SLC25A1P53007 311 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 DLX1P56177 255 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 LOXL3P58215 753 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 GNG2P59768 71 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 ACTA2P62736 377 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 ACTG2P63267 376 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 DYRK1AQ13627 763 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SNAI3Q3KNW1 292 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 KRTAP27-1Q3LI81 207 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 HSD17B12Q53GQ0 312 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 BCL2L15Q5TBC7 163 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 TEX36Q5VZQ5 186 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 BAIAP2L2Q6UXY1 529 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 C1orf122Q6ZSJ8 110 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SLC36A1Q7Z2H8 476 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 FGFRL1Q8N441 504 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SDR9C7Q8NEX9 313 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SLC26A10Q8NG04 563 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 OR8S1Q8NH09 359 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 OR2T6Q8NHC8 308 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SMIM4Q8WVI0 70 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SPTSSAQ969W0 71 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SLC25A38Q96DW6 304 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 HYLS1Q96M11 299 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 NMNAT3Q96T66 252 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 CCL13Q99616 98 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 C7orf50Q9BRJ6 194 aaKnown RBP6.41□□□□□ -1.38
CLK1-215ENST00000621181 HEXA-AS1Q9H8Q6 139 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 B9D1Q9UPM9 204 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 FOXJ3Q9UPW0 622 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 SIGLEC9Q9Y336 463 aa6.41□□□□□ -1.38
CLK1-215ENST00000621181 IGLV1-36A0A0B4J1U3 117 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 A0A1B0GW55 424 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 G3V3Q6 166 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 H3BUX3 64 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 FABP7O15540 132 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 SELENOFO60613 162 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 TMEM127O75204 238 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 ARL6IP5O75915 188 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 TXNDC12O95881 172 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 LHBP01229 141 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 CD3GP09693 182 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 DUX4L2P0CJ85 424 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 DUX4L3P0CJ86 424 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 DUX4L4P0CJ87 422 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 DUX4L5P0CJ88 424 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 DUX4L6P0CJ89 424 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 DUX4L7P0CJ90 424 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 SULT1A3P0DMM9 295 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 SULT1A4P0DMN0 295 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 MUC1P15941 1255 aaPredicted RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 MNDAP41218 407 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 INPP1P49441 399 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 NANOS3P60323 173 aaKnown RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 KLRD1Q13241 179 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 PCK2Q16822 640 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 LRRC10Q5BKY1 277 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 WDR38Q5JTN6 314 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 C11orf88Q6PI97 169 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms