RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 GABRA6Q16445 453 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 POU2AF1Q16633 256 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 DUSP5Q16690 384 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 TMEM128Q5BJH2 165 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 C9orf50Q5SZB4 431 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 WDR25Q64LD2 544 aaPredicted RBP4.88□□□□□ -1.63
LINC01538-201ENST00000588074 SLC8B1Q6J4K2 584 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 PAQR6Q6TCH4 344 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF440Q8IYI8 595 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 SLC39A11Q8N1S5 342 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 CSNK1A1LQ8N752 337 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF485Q8NCK3 441 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 GPR32P1Q8NGA4 272 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 OR2AJ1Q8NGZ0 328 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 PPP1R1CQ8WVI7 109 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 NDRG1Q92597 394 aaKnown RBP4.88□□□□□ -1.63
LINC01538-201ENST00000588074 SARAFQ96BY9 339 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 GNRHR2Q96P88 292 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 TMEM39BQ9GZU3 492 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 SLC25A51Q9H1U9 297 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 GALPQ9UBC7 116 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 VPREB3Q9UKI3 123 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 PPIAL4AQ9Y536 164 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 DSPPQ9NZW4 1301 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 RLFQ13129 1914 aa4.88□□□□□ -1.63
LINC01538-201ENST00000588074 ARID2Q68CP9 1835 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 A0A0G2JK05 382 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 A0A0J9YY10 115 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 A0A1B0GX78 115 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 TMEM8BA6NDV4 472 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF727A8MUV8 499 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DUX1O43812 170 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 HBZP02008 142 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 RAB40ALP0C0E4 278 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 LINC00032P0C843 101 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DANCRP0C864 163 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 ERGP11308 486 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 RPS4Y1P22090 263 aaKnown RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 PTH2RP49190 550 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DUSP3P51452 185 aaPredicted RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 HMGCS2P54868 508 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 PNRC1Q12796 327 aaPredicted RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 HIST3H3Q16695 136 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 IAH1Q2TAA2 248 aaPredicted RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 NIPAL3Q6P499 406 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DHRS13Q6UX07 377 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 PQLC2Q6ZP29 291 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 NR2C2APQ86WQ0 139 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 GPSM1Q86YR5 675 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 UEVLDQ8IX04 471 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 MSRB3Q8IXL7 192 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF101Q8IZC7 436 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 ZNF418Q8TF45 676 aaPredicted RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DUX5Q96PT3 197 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 MYADMQ96S97 322 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 NPY6RQ99463 290 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 PYGO2Q9BRQ0 406 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 C16orf70Q9BSU1 422 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 CHRNA10Q9GZZ6 450 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DNAJC27Q9NZQ0 273 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 RNF181Q9P0P0 153 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 CRLS1Q9UJA2 301 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 STYXL1Q9Y6J8 313 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 TRAV38-1A0A0B4J264 116 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 A0A0G2JMM0 328 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 A0A0U1RRA0 63 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 A0A1W2PPB8 328 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 KIR3DP1A8MWS1 328 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 B4DGG1 531 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 F5H5T6 163 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 J3QR89 54 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 GAPDHSO14556 408 aaPredicted RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 LATO43561 262 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DIRAS1O95057 198 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 GAPDHP04406 335 aaKnown RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 HLA-DQB2P05538 268 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 FURINP09958 794 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 CD99P14209 185 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 ACVR1BP36896 505 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 AVPR1AP37288 418 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 GYG1P46976 350 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 ATP1B3P54709 279 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 CYCSP99999 105 aaKnown RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 NFATC4Q14934 902 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 EXT1Q16394 746 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 SIGLEC15Q6ZMC9 328 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DNM1P46Q6ZS02 220 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 Q6ZWC4 215 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 CPEB2Q7Z5Q1 589 aaKnown RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 OR4D11Q8NGI4 311 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 MFSD8Q8NHS3 518 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DAZLQ92904 295 aaKnown RBP4.87□□□□□ -1.63
LINC01538-201ENST00000588074 AQP10Q96PS8 301 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 DERL1Q9BUN8 251 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 LPAR5Q9H1C0 372 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 IKZF5Q9H5V7 419 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 TFCP2L1Q9NZI6 479 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 HSPB8Q9UJY1 196 aa4.87□□□□□ -1.63
LINC01538-201ENST00000588074 YIPF1Q9Y548 306 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms