RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 HILS1P60008 231 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 ATXN7L3Q14CW9 347 aaPredicted RBP16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 TUSC1Q2TAM9 212 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 AWAT2Q6E213 333 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 BRICD5Q6PL45 260 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 ZNF782Q6ZMW2 699 aaPredicted RBP16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 C9orf139Q6ZV77 190 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 PIP4P2Q8N4L2 257 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 PPP1R35Q8TAP8 253 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 THRSPQ92748 146 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 BANF2Q9H503 90 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 TNFRSF19Q9NS68 423 aa16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 FBN1P35555 2871 aaKnown RBP16.93■□□□□ 0.3
PPP4R1-221ENST00000582240 A0A0U1RQK1 487 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 GEMIN2O14893 280 aaKnown RBP16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 MRPS14O60783 128 aaKnown RBP16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 COX7A1P24310 79 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 PSMB9P28065 219 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 BMXP51813 675 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 BAMBIQ13145 260 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 IL13RA2Q14627 380 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 PAN3Q58A45 887 aaKnown RBP16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 RBMS3Q6XE24 437 aaKnown RBP16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 C1orf122Q6ZSJ8 110 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 ZDHHC16Q969W1 377 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 COQ2Q96H96 371 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 CYYR1Q96J86 154 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 C1orf147Q96MC9 270 aaPredicted RBP16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 GFI1Q99684 422 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 KCNK15Q9H427 330 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 METTL8Q9H825 291 aaKnown RBP16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 IL36GQ9NZH8 169 aa16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 AK6Q9Y3D8 172 aaKnown RBP16.92■□□□□ 0.3
PPP4R1-221ENST00000582240 MEGF11A6BM72 1044 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 ZNF728P0DKX0 622 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 P2RX3P56373 397 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 RBM11P57052 281 aaKnown RBP16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 TRAM1Q15629 374 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 TAF9Q16594 264 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 UBE2UQ5VVX9 321 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 ZNF773Q6PK81 442 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 USP43Q70EL4 1123 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 CDH26Q8IXH8 852 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 TMEM104Q8NE00 496 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 PLPPR1Q8TBJ4 325 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 TBC1D15Q8TC07 691 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 TMEM158Q8WZ71 300 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 PHYHIPQ92561 330 aa16.91■□□□□ 0.3
PPP4R1-221ENST00000582240 A0A0A6YYJ9 748 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 A0A1W2PPH5 198 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 hADV38S2A0JD32 116 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 C17orf98A8MV24 154 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 OR7C1O76099 320 aaPredicted RBP16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 GABRA5P31644 462 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 MEF2CQ06413 473 aaPredicted RBP16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 KRBOX4Q5JUW0 171 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 OR10K2Q6IF99 312 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 TRAPPC6BQ86SZ2 158 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 NKAIN3Q8N8D7 197 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 CHST4Q8NCG5 386 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 FAM46BQ96A09 425 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 C19orf24Q9BVV8 132 aa16.9■□□□□ 0.3
PPP4R1-221ENST00000582240 TRAV39A0A0B4J263 110 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 DNAJC9-AS1A6NH13 148 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 NPFFO15130 113 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 CRTAPO75718 401 aaPredicted RBP16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 MMP23AO75900 390 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 GTF2F2P13984 249 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 PAX6P26367 422 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 CALRP27797 417 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 ERP29P30040 261 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 ATAD3CQ5T2N8 411 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 GLT8D1Q68CQ7 371 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 BAIAP2L2Q6UXY1 529 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 SUMF2Q8NBJ7 301 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 C17orf50Q8WW18 174 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 ZNF714Q96N38 554 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 SELENOIQ9C0D9 397 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 SLITRK2Q9H156 845 aa16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 UNKLQ9H9P5 680 aaKnown RBP16.89■□□□□ 0.29
PPP4R1-221ENST00000582240 MEIOCA2RUB1 952 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 HOXA3O43365 443 aaPredicted RBP16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 ZNF780AO75290 641 aaPredicted RBP16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 PSMA1P25786 263 aaKnown RBP16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 UBE2E1P51965 193 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 BPIFB3P59826 476 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 UBA52P62987 128 aaKnown RBP16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 P2RY14Q15391 338 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 SLC9A3R2Q15599 337 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 NEDD8Q15843 81 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 C1orf100Q5SVJ3 147 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 NCR3LG1Q68D85 454 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 TAF15Q92804 592 aaKnown RBP eCLIP16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 JMJD8Q96S16 334 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 UQCC2Q9BRT2 126 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 DPCDQ9BVM2 203 aaPredicted RBP16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 NDUFB11Q9NX14 153 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 KIF25Q9UIL4 384 aa16.88■□□□□ 0.29
PPP4R1-221ENST00000582240 LINC00312Q9Y6C7 94 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms