RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 BABAM2Q9NXR7 383 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 LINC00312Q9Y6C7 94 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 SESN1Q9Y6P5 492 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 IGHV2-26A0A0B4J1V2 119 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 MEGF11A6BM72 1044 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 FAM90A8PA6NJQ4 464 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 ODF3BA8MYP8 253 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 H0YJX3 145 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 SLC33A1O00400 549 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 MAGEB3O15480 346 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 KCNAB3O43448 404 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 TSPAN9O75954 239 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 CLPXO76031 633 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 VSIG10L2P0DP72 767 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 NFYBP25208 207 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 RPL15P61313 204 aaKnown RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 ST3GAL4Q11206 333 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 MRPL28Q13084 256 aaKnown RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 DOC2BQ14184 412 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 RSU1Q15404 277 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 PIGYQ3MUY2 71 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 ZNF626Q68DY1 528 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 LAIR2Q6ISS4 152 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 LYG1Q8N1E2 194 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 SETD9Q8NE22 299 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 BPIFB6Q8NFQ5 453 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 FAM110DQ8TAY7 271 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 GHSRQ92847 366 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 TMEM106AQ96A25 262 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 TMEM133Q9H2Q1 129 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 C16orf95Q9H693 158 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 ABCB10Q9NRK6 738 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 CHCHD3Q9NX63 227 aaKnown RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 NKX1-2Q9UD57 310 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 DIMT1Q9UNQ2 313 aaKnown RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 EXOSC1Q9Y3B2 195 aaKnown RBP10.11□□□□□ -0.79
SMAD3-208ENST00000558827 PCDHGB5Q9Y5G0 923 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 NOTCH1P46531 2555 aa10.11□□□□□ -0.79
SMAD3-208ENST00000558827 MEGF8Q7Z7M0 2845 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 TRGV10A0A0A0MS01 117 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 ODAMA1E959 279 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 MAGEA13PA6NCF6 341 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 OGG1O15527 345 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 WIPF1O43516 503 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 TSPAN15O95858 294 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 CAPGP40121 348 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 PAN3Q58A45 887 aaKnown RBP10.1□□□□□ -0.79
SMAD3-208ENST00000558827 DDI2Q5TDH0 399 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 Q6ZS46 218 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 AHSA2Q719I0 299 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 SAXO1Q8IYX7 474 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 ABHD12Q8N2K0 398 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 OR4C13Q8NGP0 309 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 RFESDQ8TAC1 157 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 LEAP2Q969E1 77 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 CLEC7AQ9BXN2 247 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 KIF25Q9UIL4 384 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 ZNF281Q9Y2X9 895 aa10.1□□□□□ -0.79
SMAD3-208ENST00000558827 TRAV24A0A0B4J272 114 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 A0A1W2PP11 408 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 IRGMA1A4Y4 181 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 A6NDX4 124 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 CD2P06729 351 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 SERPINA2P20848 420 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 LMO1P25800 156 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 ERP29P30040 261 aaKnown RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 C21orf33P30042 268 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 GLP1RP43220 463 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 MTNR1BP49286 362 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 PPP3R1P63098 170 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 RBM39Q14498 530 aaKnown RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 OGFRL1Q5TC84 451 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 ZNF529Q6P280 563 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 C8orf59Q8N0T1 100 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 STX19Q8N4C7 294 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 PACRGLQ8N7B6 248 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 UBALD1Q8TB05 177 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 PLPPR1Q8TBJ4 325 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 MALSU1Q96EH3 234 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 CYYR1Q96J86 154 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 SEBOXQ9HB31 216 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 ZNF286AQ9HBT8 521 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 TCF19Q9Y242 345 aa10.09□□□□□ -0.79
SMAD3-208ENST00000558827 UBE2J1Q9Y385 318 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 TBL2Q9Y4P3 447 aaKnown RBP10.09□□□□□ -0.79
SMAD3-208ENST00000558827 TRAV8-7A0A075B6U6 113 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 MEIKINA0A087WXM9 373 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 SH2D7A6NKC9 451 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-208ENST00000558827 M0QZ24 198 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 F2RL2O00254 374 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 ALX3O95076 343 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 RBP4P02753 201 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 HTR1DP28221 377 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 BDKRB2P30411 391 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 ZNF93P35789 620 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-208ENST00000558827 PTGFRP43088 359 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 KIR2DS4P43632 304 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 EFNB2P52799 333 aa10.08□□□□□ -0.8
SMAD3-208ENST00000558827 BLCAPP62952 87 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms