RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 C10orf35Q96D05 121 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 PELI1Q96FA3 418 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 NOL4LQ96MY1 436 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 COMMD4Q9H0A8 199 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 EXOSC4Q9NPD3 245 aaKnown RBP9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
PRPF40B-212ENST00000551111 TRGV10A0A0A0MS01 117 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 TRAV39A0A0B4J263 110 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 LEUTXA8MZ59 168 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 E9PI62 339 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 E9PQ18 207 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 J3QLW9 94 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 HSPB6O14558 160 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 OR2F2O95006 317 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 PF4P02776 101 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF44P15621 663 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF19P17023 458 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF20P17024 532 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 PRKACBP22694 351 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 NFYBP25208 207 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 ZP1P60852 638 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 CDC42P60953 191 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 IL18R1Q13478 541 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 KPNB1Q14974 876 aaKnown RBP9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 KHDC1LQ5JSQ8 128 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 KRBOX4Q5JUW0 171 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM53AQ6NSI3 398 aaPredicted RBP9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 ZBTB49Q6ZSB9 765 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 C16orf82Q7Z2V1 217 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM220AQ7Z4H9 259 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 CCDC54Q8NEL0 328 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 OR13A1Q8NGR1 328 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF596Q8TC21 504 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 RNFT2Q96EX2 444 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 KIRREL1Q96J84 757 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 GAL3ST2Q9H3Q3 398 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 ISG20L2Q9H9L3 353 aaKnown RBP9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 TAS2R3Q9NYW6 316 aa9.16□□□□□ -0.94
PRPF40B-212ENST00000551111 A0A087X0M5 115 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 TRAV24A0A0B4J272 114 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 A0A1B0GX30 115 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 A0A1W2PPE3 182 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 DAPL1A0PJW8 107 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A18PA6NE21 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A16PA6NEW6 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A20PA6NIJ5 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 LINC01548A6NM66 108 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A9PA6NNJ1 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A12PA8MX19 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A5PA8MXJ8 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 SLC16A6O15403 523 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 CYB5AP00167 134 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 ALDOBP05062 364 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 SNRNP70P08621 437 aaKnown RBP9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A15PP0C7V4 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A13PP0C7W8 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A14PP0C7W9 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM90A24PP0C7X0 464 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 BRS3P32247 399 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 PTGFRP43088 359 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 ALKBH1Q13686 389 aaKnown RBP9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 HNF4GQ14541 408 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 LTC4SQ16873 150 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 ZIK1Q3SY52 487 aaPredicted RBP9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 C1orf146Q5VVC0 180 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 OR52W1Q6IF63 320 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 RTN4RL2Q86UN3 420 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 LHFPL3Q86UP9 236 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 MRPL41Q8IXM3 137 aaKnown RBP9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 LINC00482Q8N8I6 264 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 OR13C3Q8NGS6 347 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 OR56B4Q8NH76 319 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 CAPSLQ8WWF8 208 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 SPSB1Q96BD6 273 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 CENPNQ96H22 339 aaPredicted RBP9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 HRASLS5Q96KN8 279 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 C4orf36Q96KX1 117 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 NR1H4Q96RI1 486 aaPredicted RBP9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 ZNF649Q9BS31 505 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 NEK6Q9HC98 313 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 FAM53CQ9NYF3 392 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 GLS2Q9UI32 602 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 KIF25Q9UIL4 384 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 MYRFQ9Y2G1 1151 aa9.15□□□□□ -0.94
PRPF40B-212ENST00000551111 TENM3Q9P273 2699 aa9.15□□□□□ -0.95
PRPF40B-212ENST00000551111 TOR1AO14656 332 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 DEGS1O15121 323 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 MT-ND2P03891 347 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 HTR1AP08908 422 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 CCDC159P0C7I6 412 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 VSIG8P0DPA2 414 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 CCR9P51686 369 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 SLC35A2P78381 396 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 TMED1Q13445 227 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 ZSCAN26Q16670 478 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 VAX1Q5SQQ9 334 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 LPCAT4Q643R3 524 aa9.14□□□□□ -0.95
PRPF40B-212ENST00000551111 DRAM1Q8N682 238 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms