RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SCGB1D2O95969 90 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 MBPP02686 304 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 TNFSF10P50591 281 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 TSC22D1Q15714 1073 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 IGFBP7Q16270 282 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 MPV17LQ2QL34 196 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 ATRAIDQ6UW56 229 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 SPERTQ8NA61 448 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 LHFPL5Q8TAF8 219 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 PRRX2Q99811 253 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 SYT3Q9BQG1 590 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 ANKRD30BLA7E2S9 258 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 PRSS44E7EML9 344 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 H7C1Q1 480 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 K7EPK0 472 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 NKX2-8O15522 239 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 SCTP09683 121 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 PRKACAP17612 351 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 RCC1P18754 421 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 NOVA1P51513 510 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 SMCO1Q147U7 214 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 OR2T2Q6IF00 324 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 MYPOPQ86VE0 399 aaPredicted RBP15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 FAM71E2Q8N5Q1 922 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 SUMF1Q8NBK3 374 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 TP53RKQ96S44 253 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 ZC4H2Q9NQZ6 224 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 CACNA1HO95180 2353 aa15.85■□□□□ 0.13
PRPF40B-208ENST00000548436 RAB19A4D1S5 217 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 TAAR5O14804 337 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 PHF1O43189 567 aaPredicted RBP15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 IL32P24001 234 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 HERPUD1Q15011 391 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 SRSF7Q16629 238 aaKnown RBP eCLIP15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 SPATA46Q5T0L3 261 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 PXDC1Q5TGL8 231 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 LRFN3Q9BTN0 628 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 GP6Q9HCN6 339 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 AMDHD2Q9Y303 409 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 MPC1Q9Y5U8 109 aa15.84■□□□□ 0.13
PRPF40B-208ENST00000548436 CDRT15L2A8MXV6 281 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 GNRHRP30968 328 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 MST1LQ2TV78 715 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 DPPA2Q7Z7J5 298 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 CCDC36Q8IYA8 594 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 LGI3Q8N145 548 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 CCDC71LQ8N9Z2 235 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 DEFB124Q8NES8 71 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 NANOS1Q8WY41 292 aaKnown RBP15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 TAF9BQ9HBM6 251 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 FAM86C1Q9NVL1 165 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 GLS2Q9UI32 602 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 LHX6Q9UPM6 363 aa15.83■□□□□ 0.13
PRPF40B-208ENST00000548436 BET1O15155 118 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 TPD52L2O43399 206 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 DIRAS3O95661 229 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 CELA3BP08861 270 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 CA6P23280 308 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 ARHGDIBP52566 201 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 UQCC3Q6UW78 93 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 OR52M1Q8NGK5 317 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 NEK7Q8TDX7 302 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 NARS2Q96I59 477 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 PARD6AQ9NPB6 346 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 FBXL17Q9UF56 701 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 ZNF175Q9Y473 711 aa15.83■□□□□ 0.12
PRPF40B-208ENST00000548436 ZFHX4Q86UP3 3567 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 MPPED1O15442 326 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 WISP2O76076 250 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 KCNJ3P48549 501 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 CCL11P51671 97 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 AKR1C2P52895 323 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 TMEM33P57088 247 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 GNG3P63215 75 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 AKR1C1Q04828 323 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 C17orf78Q8N4C9 275 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 SUMF2Q8NBJ7 301 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 LPAR3Q9UBY5 353 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 ASPMQ8IZT6 3477 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 C3orf85A0A1B0GTC6 90 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 SPAARA0A1B0GVQ0 90 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 A0A1W2PR80 420 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 OR5B21A6NL26 309 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 ZNF705EA8MWA4 302 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 RHBDL1O75783 438 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 CD82P27701 267 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 C20orf204Q6ZNR8 217 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 LDLRAD3Q86YD5 345 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 ZNF573Q86YE8 665 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 FDCSPQ8NFU4 85 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 GMPPAQ96IJ6 420 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 SMIM3Q9BZL3 60 aa15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 PRRC2CQ9Y520 2896 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-208ENST00000548436 IGKV1-6A0A0C4DH72 117 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 TK1P04183 234 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 FTH1P19P0C7X4 201 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 ZNF14P17017 642 aaPredicted RBP15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 SRSF3P84103 164 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 TMEM268Q5VZI3 342 aa15.81■□□□□ 0.12
PRPF40B-208ENST00000548436 CLEC9AQ6UXN8 241 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms