RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CNOT2Q9NZN8 540 aaKnown RBP9.21□□□□□ -0.94
RAB5C-203ENST00000546881 DIMT1Q9UNQ2 313 aaKnown RBP9.21□□□□□ -0.94
RAB5C-203ENST00000546881 SESN1Q9Y6P5 492 aa9.21□□□□□ -0.94
RAB5C-203ENST00000546881 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.94
RAB5C-203ENST00000546881 LOC107986453A0A1B0GWG9 222 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 PTGES3LE9PB15 166 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 HAND1O96004 215 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 CCDC159P0C7I6 412 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 OCM2P0CE71 109 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 OCMP0CE72 109 aaPredicted RBP9.2□□□□□ -0.94
RAB5C-203ENST00000546881 CALCBP10092 127 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 ZNF20P17024 532 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 MYF6P23409 242 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 DUSP1P28562 367 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 ETV1P50549 477 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 ALKBH1Q13686 389 aaKnown RBP9.2□□□□□ -0.94
RAB5C-203ENST00000546881 UBE2V2Q15819 145 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 DEFB121Q5J5C9 76 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 C6orf141Q5SZD1 244 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 TCF23Q7RTU1 214 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 HAVCR2Q8TDQ0 301 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 MYDGFQ969H8 173 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 BORCS8Q96FH0 119 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 CLEC7AQ9BXN2 247 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 TMEM133Q9H2Q1 129 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 IL36RNQ9UBH0 155 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 PSORS1C1Q9UIG5 152 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 TPRKBQ9Y3C4 175 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 LINC00312Q9Y6C7 94 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 NOTCH3Q9UM47 2321 aa9.2□□□□□ -0.94
RAB5C-203ENST00000546881 IGKV1-27A0A075B6S5 117 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 TRBV2A0A0J9YWF9 115 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 FAM172BPA6NC97 362 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 SH2D7A6NKC9 451 aaPredicted RBP9.19□□□□□ -0.94
RAB5C-203ENST00000546881 DHRS7CA6NNS2 312 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 GATBO75879 557 aaKnown RBP9.19□□□□□ -0.94
RAB5C-203ENST00000546881 SERPINA3P01011 423 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 LPLP06858 475 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 LIMS3P0CW19 117 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 LIMS4P0CW20 117 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 AZGP1P25311 298 aaKnown RBP9.19□□□□□ -0.94
RAB5C-203ENST00000546881 HTR1DP28221 377 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 KIR3DL2P43630 455 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 POU3F4P49335 361 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 FUT6P51993 359 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 SLC35A2P78381 396 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 CD83Q01151 205 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 C9orf152Q5JTZ5 239 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 VAX1Q5SQQ9 334 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 OR2G6Q5TZ20 316 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 RDH10Q8IZV5 341 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 CCDC54Q8NEL0 328 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 OR52N4Q8NGI2 321 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 OR13C3Q8NGS6 347 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 OR5AK2Q8NH90 309 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 FBLIM1Q8WUP2 373 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 TSEN15Q8WW01 171 aaKnown RBP9.19□□□□□ -0.94
RAB5C-203ENST00000546881 AKR1E2Q96JD6 320 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 JAM3Q9BX67 310 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 CCDC90BQ9GZT6 254 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.19□□□□□ -0.94
RAB5C-203ENST00000546881 PLCXD1Q9NUJ7 323 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 RBFOX1Q9NWB1 397 aaKnown RBP9.19□□□□□ -0.94
RAB5C-203ENST00000546881 FRRS1LQ9P0K9 344 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 CLEC2DQ9UHP7 191 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 HHLA2Q9UM44 414 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 ERGIC3Q9Y282 383 aa9.19□□□□□ -0.94
RAB5C-203ENST00000546881 TMEM212A6NML5 194 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 K7EIL1 84 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 SIRPB1O00241 398 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 MMP23AO75900 390 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 CYB5AP00167 134 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 RPSAP08865 295 aaKnown RBP9.18□□□□□ -0.94
RAB5C-203ENST00000546881 PRKACAP17612 351 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 BCL3P20749 454 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 CCL1P22362 96 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 BRS3P32247 399 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 NPBWR2P48146 333 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 CCR9P51686 369 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 GTF2A1P52655 376 aaPredicted RBP9.18□□□□□ -0.94
RAB5C-203ENST00000546881 NANOS3P60323 173 aaKnown RBP9.18□□□□□ -0.94
RAB5C-203ENST00000546881 ABCA11PQ4W5N1 156 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 FDX2Q6P4F2 183 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 BAIAP2L2Q6UXY1 529 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 ABHD12Q8N2K0 398 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 WFDC9Q8NEX5 89 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 OR4X2Q8NGF9 303 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 OR4P4Q8NGL7 312 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 OR52N1Q8NH53 320 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 NR1H4Q96RI1 486 aaPredicted RBP9.18□□□□□ -0.94
RAB5C-203ENST00000546881 SLC25A33Q9BSK2 321 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 ING3Q9NXR8 418 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 BLOC1S6Q9UL45 172 aa9.18□□□□□ -0.94
RAB5C-203ENST00000546881 TSSC4Q9Y5U2 329 aaPredicted RBP9.18□□□□□ -0.94
RAB5C-203ENST00000546881 PNMA8CA0A1B0GUJ8 204 aa9.17□□□□□ -0.94
RAB5C-203ENST00000546881 FAM90A22PA8MWA6 464 aa9.17□□□□□ -0.94
RAB5C-203ENST00000546881 E9PI62 339 aa9.17□□□□□ -0.94
RAB5C-203ENST00000546881 MGST3O14880 152 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms