RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SLC16A6O15403 523 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 MT-ND2P03891 347 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ZNF44P15621 663 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 IGLL1P15814 213 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CD34P28906 385 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CEACAM3P40198 252 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ALDH3A2P51648 485 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 SCN1BQ07699 218 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ABCA11PQ4W5N1 156 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR4D6Q8NGJ1 314 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR5D18Q8NGL1 313 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR13C3Q8NGS6 347 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR13C9Q8NGT0 318 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 SPACA5Q96QH8 159 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 NEK6Q9HC98 313 aa15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 TSSC4Q9Y5U2 329 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1B-204ENST00000536782 KIAA2026Q5HYC2 2103 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ODAMA1E959 279 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 J3QRE1 110 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 EI24O14681 340 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR2F2O95006 317 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CSN2P05814 226 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 LPLP06858 475 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 GDNFP39905 211 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 PTGFRP43088 359 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 HLA-DRB5Q30154 266 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 TCTEX1D4Q5JR98 221 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 SLC25A30Q5SVS4 291 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 MEDAGQ5VYS4 303 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 RNF144BQ7Z419 303 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 SAXO1Q8IYX7 474 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 CHST4Q8NCG5 386 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR51A4Q8NGJ6 313 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 OR10AC1Q8NH08 325 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 RBM14Q96PK6 669 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ZNF286AQ9HBT8 521 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 ING3Q9NXR8 418 aa15.71■□□□□ 0.11
TNFRSF1B-204ENST00000536782 BUB1B-PAK6H3BSN5 160 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 J3QLW9 94 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 PF4P02776 101 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ZNF19P17023 458 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 PRRX1P54821 245 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 KRBOX4Q5JUW0 171 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 TPTE2P1Q5T6R2 138 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 Q6P435 159 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 PQLC1Q8N2U9 271 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ACBD7Q8N6N7 88 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OR4X2Q8NGF9 303 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MYDGFQ969H8 173 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 HRASLS5Q96KN8 279 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 C9orf16Q9BUW7 83 aa15.7■□□□□ 0.1
TNFRSF1B-204ENST00000536782 A0A087X0M5 115 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 A0A1B0GX30 115 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SNTNA6NMZ2 147 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OR4C45A6NMZ5 311 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ZNF729A6NN14 1252 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SLC33A1O00400 549 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 DEGS1O15121 323 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MNDAP41218 407 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SNRPGP62308 76 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ALKBH1Q13686 389 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 RBM39Q14498 530 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 CCDC144NLQ6NUI1 221 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 CBR4Q8N4T8 237 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 PELI1Q96FA3 418 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MRPL48Q96GC5 212 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 COQ2Q96H96 371 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 C4orf36Q96KX1 117 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ZCCHC4Q9H5U6 513 aa15.69■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OOSP1A8MZH6 123 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 E9PQ18 207 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 LY6LH3BQJ8 138 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 M0QZK8 103 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 AMY1AP04745 511 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 AMY2AP04746 511 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 TMEM225BP0DP42 221 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OR3A4PP47883 348 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SLC35A2P78381 396 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ATXN7L3Q14CW9 347 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MYCBPQ99417 103 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OR6C3Q9NZP0 311 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 EXOGQ9Y2C4 368 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MYRFQ9Y2G1 1151 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 DNAH9Q9NYC9 4486 aa15.68■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SH2D7A6NKC9 451 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MPIG6BO95866 241 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 HCKP08631 526 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 DBTP11182 482 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 NFYBP25208 207 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 CDK5R1Q15078 307 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 KISS1Q15726 138 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 C17orf58Q2M2W7 97 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 KHDC1LQ5JSQ8 128 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 C9orf152Q5JTZ5 239 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SERPINA12Q8IW75 414 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OR5D14Q8NGL3 314 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OR9G1Q8NH87 305 aa15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 RCC1LQ96I51 464 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 PPIL3Q9H2H8 161 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1B-204ENST00000536782 KBTBD11-OT1A0A1B0GTJ5 212 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms