RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TMEM178AQ8NBL3 297 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 OR1F12Q8NHA8 337 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 SGK3Q96BR1 496 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 KIRREL1Q96J84 757 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 SULT4A1Q9BR01 284 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 WNT5BQ9H1J7 359 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 NAA60Q9H7X0 242 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 IL36GQ9NZH8 169 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 STRAPQ9Y3F4 350 aaKnown RBP9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 TRGV5A0A0B4J1U4 118 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 GPR137BO60478 399 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 WISP2O76076 250 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 GABRR1P24046 479 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 NPBWR1P48145 328 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 UCP2P55851 309 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 TMEM33P57088 247 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 IL13RA2Q14627 380 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 OR8B8Q15620 311 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 TSC22D1Q15714 1073 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 DEFB109BQ30KR1 87 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 RNF212Q495C1 297 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 SHEQ5VZ18 495 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 C6orf201Q7Z4U5 140 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF100Q8IYN0 542 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 CCDC71LQ8N9Z2 235 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 CMSS1Q9BQ75 279 aaKnown RBP9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 OR2H1Q9GZK4 316 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 TUBA4BQ9H853 241 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 ZDHHC11Q9H8X9 412 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 RNF122Q9H9V4 155 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 BCO1Q9HAY6 547 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 PRR13Q9NZ81 148 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 FBXL17Q9UF56 701 aa9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 FBXO9Q9UK97 447 aaPredicted RBP9.51□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF98A6NK75 572 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF850A8MQ14 1090 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 H7C1Q1 480 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 TSPAN15O95858 294 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 MMP7P09237 267 aaPredicted RBP9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 ACKR3P25106 362 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 P2RY1P47900 373 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 RBP2P50120 134 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 RAB5BP61020 215 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 ARF1P84077 181 aaKnown RBP9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 LGI3Q8N145 548 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 BHLHE23Q8NDY6 225 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 PIGTQ969N2 578 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 WDYHV1Q96HA8 205 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 SMDT1Q9H4I9 107 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 LUZP4Q9P127 313 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 AMDHD2Q9Y303 409 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 STARD10Q9Y365 291 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 TIMM10BQ9Y5J6 103 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 IGF2RP11717 2491 aa9.5□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF503-AS2A6NEH8 195 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 PRSS44E7EML9 344 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 FARS2O95363 451 aaKnown RBP9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 DUSP1P28562 367 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 PIGPP57054 158 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 SRPXP78539 464 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 TMEM187Q14656 261 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 Q6ZRG5 221 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 NUFIP2Q7Z417 695 aaKnown RBP9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM185AQ8N0U4 392 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 CPEB3Q8NE35 698 aaKnown RBP9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 MAFIPQ8WZ33 124 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 APH1AQ96BI3 265 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 BORCS8Q96FH0 119 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 REEP6Q96HR9 211 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 GINS3Q9BRX5 216 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 EGLN1Q9GZT9 426 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 TMEM231Q9H6L2 316 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 C12orf49Q9H741 205 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF286AQ9HBT8 521 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 PARPBPQ9NWS1 579 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 LSM5Q9Y4Y9 91 aaKnown RBP9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 DOCK7Q96N67 2140 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF724A8MTY0 619 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF587BE7ETH6 402 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 HLA-HP01893 362 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 LCATP04180 440 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 GLAP06280 429 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 DANCRP0C864 163 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 CD80P33681 288 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 GLP1RP43220 463 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 FUT6P51993 359 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 PCBD1P61457 104 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 RNPS1Q15287 305 aaKnown RBP9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 KRTAP27-1Q3LI81 207 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 TMEM42Q69YG0 159 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 TMEM211Q6ICI0 200 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 OR2A2Q6IF42 318 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 UNQ6494/PRO21346Q6UXR6 183 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 LIAT1Q6ZQX7 453 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 FOXRED2Q8IWF2 684 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 LFNGQ8NES3 379 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms