RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PRELID3BQ9Y3B1 194 aa2.7□□□□□ -1.98
HMGB1P22-201ENST00000505315 A0A1W2PP64 1363 aa2.7□□□□□ -1.98
HMGB1P22-201ENST00000505315 COL3A1P02461 1466 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P22-201ENST00000505315 ADAMTSL3P82987 1691 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ASTN1O14525 1302 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 DENND4AQ7Z401 1863 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CACNA1FO60840 1977 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 IGKV1-27A0A075B6S5 117 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 TEX50A0A1B0GTY4 177 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 INS-IGF2F8WCM5 200 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 KLRC4O43908 158 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CST2P09228 141 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CD36P16671 472 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 GADD45AP24522 165 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 HTR1EP28566 365 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 S100A2P29034 98 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 MIPP30301 263 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 RPL5P46777 297 aaKnown RBP2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 NMUP48645 174 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 MNAT1P51948 309 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 TAS2R41P59536 307 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 RAB2AP61019 212 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 S100A12P80511 92 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CDK5Q00535 292 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 IFITM2Q01629 132 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 PAFAH1B3Q15102 231 aaKnown RBP2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CDK10Q15131 360 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 IRF4Q15306 451 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 LRRC26Q2I0M4 334 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF658BQ4V348 819 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 SLC25A30Q5SVS4 291 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ATAD3CQ5T2N8 411 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 TSPO2Q5TGU0 170 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 TMEM215Q68D42 235 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CGB2Q6NT52 195 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 C3orf33Q6P1S2 294 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF613Q6PF04 617 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ACP7Q6ZNF0 438 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF497Q6ZNH5 498 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CALHM3Q86XJ0 350 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF584Q8IVC4 421 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 DRAM1Q8N682 238 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF525Q8N782 197 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 OR1L8Q8NGR8 309 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 OR52P1PQ8NH57 321 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ABHD3Q8WU67 409 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ORAOV1Q8WV07 137 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 PTX4Q96A99 478 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 TAMM41Q96BW9 452 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 LRRC58Q96CX6 371 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZHX1-C8orf76Q96EF9 292 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 DIRAS2Q96HU8 199 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 TMEM101Q96IK0 257 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 SLC35E1Q96K37 410 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 CEP170P1Q96L14 293 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 OR52B2Q96RD2 323 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 ATOH8Q96SQ7 321 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 DEFB126Q9BYW3 111 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 INIPQ9NRY2 104 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 RBM12B-AS1Q9P1G2 102 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 HHLA2Q9UM44 414 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 WSB1Q9Y6I7 421 aa2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 EIF3AQ14152 1382 aaKnown RBP2.69□□□□□ -1.98
HMGB1P22-201ENST00000505315 IGHV6-1A0A0B4J1U7 121 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 CD300LBA8K4G0 201 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 KRBOX1C9JBD0 128 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 D6RAR5 112 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 C8orf87E5RJ46 101 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 DNASE2O00115 360 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 COPEO14579 308 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF354AO60765 605 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 CA2P00918 260 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 SOD3P08294 240 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 FBP1P09467 338 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 OR4Q2P0C623 313 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 CFC1BP0CG36 223 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 CFC1P0CG37 223 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 SLC6A1P30531 599 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 CXCL5P42830 114 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 MP68P56378 58 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 KRTAP10-2P60368 255 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 DAD1P61803 113 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 MEF2CQ06413 473 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 PRDX4Q13162 271 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 C16orf72Q14CZ0 275 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 KIAA0040Q15053 153 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 MPPED2Q15777 294 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 SSX1Q16384 188 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 Q1RN00 199 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 FBXL19-AS1Q494R0 122 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF404Q494X3 552 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 MPV17L2Q567V2 206 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 FAM222AQ5U5X8 452 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 FBXL22Q6P050 247 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 ZNF530Q6P9A1 599 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 CEMP1Q6PRD7 247 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 ATP5L2Q7Z4Y8 100 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 CAMK2N1Q7Z7J9 78 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 PRNTQ86SH4 94 aa2.68□□□□□ -1.98
HMGB1P22-201ENST00000505315 PDPNQ86YL7 162 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms