RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	NXNL2	Q5VZ03	156 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	FAHD1	Q6P587	224 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	LCNL1	Q6ZST4	164 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	TMEM163	Q8TC26	289 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	CHPT1	Q8WUD6	406 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	IL4I1	Q96RQ9	567 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	MNT	Q99583	582 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	PPIL3	Q9H2H8	161 aa	Known RBP	10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	EXOSC4	Q9NPD3	245 aa	Known RBP	10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	GAR1	Q9NY12	217 aa	Known RBP	10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	KIAA2026	Q5HYC2	2103 aa		10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.79	□□□□□ -0.68
SAMM50-204	ENST00000493161	METTL15	A6NJ78	407 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	AQP12B	A6NM10	295 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	SERPINE3	A8MV23	424 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	SH2D1B	O14796	132 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	MNDA	P41218	407 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	PTGFR	P43088	359 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	PRRX1	P54821	245 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	CDC42	P60953	191 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	PDZK1IP1	Q13113	114 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	DCTN2	Q13561	401 aa	Known RBP	10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161		Q6P435	159 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	THNSL2	Q86YJ6	484 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	ZNF695	Q8IW36	515 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	AQP12A	Q8IXF9	295 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	DRAM1	Q8N682	238 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	DNAAF1	Q8NEP3	725 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	OR4D6	Q8NGJ1	314 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	TOMM40L	Q969M1	308 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	CREB3L1	Q96BA8	519 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	SPACA5	Q96QH8	159 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	ADI1	Q9BV57	179 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	ZFP57	Q9NU63	452 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	GLS2	Q9UI32	602 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	SACS	Q9NZJ4	4579 aa		10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.78	□□□□□ -0.68
SAMM50-204	ENST00000493161	TENM2	Q9NT68	2774 aa		10.77	□□□□□ -0.68
SAMM50-204	ENST00000493161		A0A1W2PPI3	338 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	OOSP1	A8MZH6	123 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	CCL24	O00175	119 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	FKBP6	O75344	327 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	SERPINA3	P01011	423 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	RPLP1	P05386	114 aa	Known RBP	10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	CGB3	P0DN86	165 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	CGB7	P0DN87	165 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	TMEM11	P17152	192 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	ATF1	P18846	271 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	GNGT1	P63211	74 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	HES1	Q14469	280 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	KRBOX4	Q5JUW0	171 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	C12orf73	Q69YU5	71 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	CCDC144NL	Q6NUI1	221 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR5D18	Q8NGL1	313 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	RPE	Q96AT9	228 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	KIRREL1	Q96J84	757 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	THTPA	Q9BU02	230 aa		10.77	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZAR1L	A6NP61	321 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	C3orf84	H3BNL1	204 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	SLC33A1	O00400	549 aa	Predicted RBP	10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	RAMP3	O60896	148 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	KDM4B	O94953	1096 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	CYB5A	P00167	134 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZNF44	P15621	663 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	TP53I3	Q53FA7	332 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	SLC35E3	Q7Z769	313 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	STPG2	Q8N412	459 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR9G1	Q8NH87	305 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	PP6455	Q8WZ26	134 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	FGGY	Q96C11	551 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	RBMXL1	Q96E39	390 aa	Known RBP	10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	COMMD4	Q9H0A8	199 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	DCLRE1B	Q9H816	532 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	SCOC	Q9UIL1	159 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	STAB2	Q8WWQ8	2551 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	BIRC6	Q9NR09	4857 aa		10.76	□□□□□ -0.69
SAMM50-204	ENST00000493161	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	FUOM	A2VDF0	154 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZNF729	A6NN14	1252 aa	Predicted RBP	10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161		J3QR06	171 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	HSPB6	O14558	160 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	IGKV1D-33	P01593	117 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	IGKV1-33	P01594	117 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	IGHG2	P01859	326 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	CSN2	P05814	226 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	CALB2	P22676	271 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	SLC6A1	P30531	599 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	ECI1	P42126	302 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	ISL1	P61371	349 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZNF85	Q03923	595 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	CDK5R1	Q15078	307 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	LTC4S	Q16873	150 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	CASC10	Q5T4H9	136 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	LHFPL2	Q6ZUX7	228 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	UTS2B	Q765I0	119 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	SPATA24	Q86W54	205 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	CCDC54	Q8NEL0	328 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR10H4	Q8NGA5	316 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms