RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 C9orf40Q8IXQ3 194 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 SLC24A4Q8NFF2 622 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 OR5D14Q8NGL3 314 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 OR14L1PQ8NHC6 308 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 SCGB3A2Q96PL1 93 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 C20orf144Q9BQM9 153 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 LPAR5Q9H1C0 372 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 C1orf123Q9NWV4 160 aa10.09□□□□□ -0.79
SEC61A1-205ENST00000483956 A0A1B0GUS0 222 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM238C9JI98 176 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 SEMA4FO95754 770 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 HLA-DOBP13765 273 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 CTSEP14091 401 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 EMP2P54851 167 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 FMODQ06828 376 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 PLCXD2Q0VAA5 305 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 OR8G2PQ6IF36 304 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 Q6ZVH6 145 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 STPG4Q8N801 248 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 CLDND2Q8NHS1 167 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 VPS25Q9BRG1 176 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 P4HTMQ9NXG6 502 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 FIGNL2A6NMB9 653 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 B4DGG1 531 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 TNFSF13O75888 250 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 IGHV4-34P06331 123 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 ATP6V0CP27449 155 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 MMDQ15546 238 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 GCNT2Q8N0V5 402 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM170AQ8WVE7 144 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 MS4A10Q96PG2 267 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 PBOV1Q9GZY1 135 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 CHRNA10Q9GZZ6 450 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 PCNX3Q9H6A9 2034 aa10.08□□□□□ -0.8
SEC61A1-205ENST00000483956 A0A0A6YYD4 124 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 HSBP1L1C9JCN9 74 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 NPIPA5E9PKD4 350 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 MS4A18H0YCH9 400 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 PPBPP02775 128 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 CA3P07451 260 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 HIST1H1DP16402 221 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 ZNF93P35789 620 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 MS4A18Q3C1V0 323 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 LHFPL1Q86WI0 220 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 OR5H2Q8NGV7 314 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 IL22RA2Q969J5 263 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 C1orf147Q96MC9 270 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 WWTR1Q9GZV5 400 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 NPIPA1Q9UND3 350 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 RNF115Q9Y4L5 304 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 TRAPPC6AO75865 159 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 C1orf61Q13536 156 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 ENDOGQ14249 297 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 MPV17LQ2QL34 196 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 C1orf185Q5T7R7 199 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 HLA-DQA1Q5Y7H0 255 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 KLHL24Q6TFL4 600 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 RHBDD1Q8TEB9 315 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 SLAMF6Q96DU3 332 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 MOB1AQ9H8S9 216 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 CENPMQ9NSP4 180 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 CCDC85CA6NKD9 419 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 IFNA21P01568 189 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 FASLGP48023 281 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 MRPS21P82921 87 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 FOXK1P85037 733 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 PLAC9Q5JTB6 97 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 COX15Q7KZN9 410 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 KCNG3Q8TAE7 436 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 ZCCHC14Q8WYQ9 949 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 SEPSECSQ9HD40 501 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 B3GALT5Q9Y2C3 310 aa10.07□□□□□ -0.8
SEC61A1-205ENST00000483956 NSG1A0A0A6YYJ2 146 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 IGKV1D-43A0A0B4J1Z2 117 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 OR2J2O76002 312 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 PFN1P07737 140 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 OR5G3P0C626 314 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 PNRC1Q12796 327 aaPredicted RBP10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 WDFY1Q8IWB7 410 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 TMEM256Q8N2U0 113 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 IL22RA1Q8N6P7 574 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 ZNF441Q8N8Z8 693 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 OR10S1Q8NGN2 331 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 ORAOV1Q8WV07 137 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 REEP6Q96HR9 211 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 CIB3Q96Q77 187 aaPredicted RBP10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 PCGF1Q9BSM1 259 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 CALHM2Q9HA72 323 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 RNF24Q9Y225 148 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 LILRA5A6NI73 299 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 NUPR1O60356 82 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 RAD51DO75771 328 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 AMY2BP19961 511 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 IL11P20809 199 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 BLKP51451 505 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 CCR5P51681 352 aa10.06□□□□□ -0.8
SEC61A1-205ENST00000483956 HIST1H3AP68431 136 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms