RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TCRBV4S1A1TA0A5B7 111 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 BUB1B-PAK6H3BSN5 160 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 PIN1P1O15428 100 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 IGLV1-47P01700 117 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 MT-ND2P03891 347 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 ALDOBP05062 364 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 ALPLP05186 524 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 TMEM225BP0DP42 221 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 PRRX1P54821 245 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 LOXL3P58215 753 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 ALKBH1Q13686 389 aaKnown RBP10.61□□□□□ -0.71
CPSF4-210ENST00000469897 ABCA11PQ4W5N1 156 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 KRBOX4Q5JUW0 171 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 CCDC121Q6ZUS5 278 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 OR4D6Q8NGJ1 314 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 CAPSLQ8WWF8 208 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 PHF21AQ96BD5 680 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 NR1H4Q96RI1 486 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-210ENST00000469897 COMMD4Q9H0A8 199 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 LIN7BQ9HAP6 207 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 AURKAIP1Q9NWT8 199 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-210ENST00000469897 PCDHGB5Q9Y5G0 923 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 ORC6Q9Y5N6 252 aa10.61□□□□□ -0.71
CPSF4-210ENST00000469897 ODAMA1E959 279 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 E9PI62 339 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 E9PQ18 207 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 SLC33A1O00400 549 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-210ENST00000469897 EI24O14681 340 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 HCKP08631 526 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 CD33P20138 364 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 RBM39Q14498 530 aaKnown RBP10.6□□□□□ -0.71
CPSF4-210ENST00000469897 ATXN7L3Q14CW9 347 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-210ENST00000469897 CDK5R1Q15078 307 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 KISS1Q15726 138 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 C17orf58Q2M2W7 97 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 TPTE2P1Q5T6R2 138 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 FOXB2Q5VYV0 432 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 C16orf82Q7Z2V1 217 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 SERPINA12Q8IW75 414 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 OR5D14Q8NGL3 314 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 COQ2Q96H96 371 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 AKR1E2Q96JD6 320 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 RBM14Q96PK6 669 aaKnown RBP10.6□□□□□ -0.71
CPSF4-210ENST00000469897 SLC25A33Q9BSK2 321 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 AMBNQ9NP70 447 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 MYRFQ9Y2G1 1151 aa10.6□□□□□ -0.71
CPSF4-210ENST00000469897 TET2Q6N021 2002 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-210ENST00000469897 SNTNA6NMZ2 147 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 LY6LH3BQJ8 138 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 OR2F2O95006 317 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 IGHV3-7P01780 117 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 AMY1AP04745 511 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 AMY2AP04746 511 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 PF4V1P10720 104 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 NFYBP25208 207 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 CD34P28906 385 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 CEACAM3P40198 252 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 PTGFRP43088 359 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 OR3A4PP47883 348 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 GALEQ14376 348 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 HLA-DRB5Q30154 266 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 C9orf152Q5JTZ5 239 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 C10orf99Q6UWK7 81 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 CBR4Q8N4T8 237 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 ZNF565Q8N9K5 539 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 CHST4Q8NCG5 386 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 MYDGFQ969H8 173 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 ALG8Q9BVK2 526 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 PPIL3Q9H2H8 161 aaKnown RBP10.59□□□□□ -0.71
CPSF4-210ENST00000469897 RHOFQ9HBH0 211 aa10.59□□□□□ -0.71
CPSF4-210ENST00000469897 KBTBD11-OT1A0A1B0GTJ5 212 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 ZNF729A6NN14 1252 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-210ENST00000469897 H0YJX3 145 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 H3BNX3 289 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 HSPB6O14558 160 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 SULT1B1O43704 296 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 ZFPL1O95159 310 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 CGB3P0DN86 165 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 CGB7P0DN87 165 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 GABRB1P18505 474 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 MNDAP41218 407 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 ALDH3A2P51648 485 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 ARHGDIBP52566 201 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 ZP1P60852 638 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 RFESDQ8TAC1 157 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 LEAP2Q969E1 77 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 PDCD1LG2Q9BQ51 273 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 ZNF649Q9BS31 505 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 OR6C3Q9NZP0 311 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 DHDHQ9UQ10 334 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 GMPPBQ9Y5P6 360 aa10.58□□□□□ -0.72
CPSF4-210ENST00000469897 TSSC4Q9Y5U2 329 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-210ENST00000469897 MEIKINA0A087WXM9 373 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 A0A087X0M5 115 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 A0A1B0GX30 115 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 ALX3O95076 343 aa10.57□□□□□ -0.72
CPSF4-210ENST00000469897 CSN2P05814 226 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms