RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 MALSU1Q96EH3 234 aa13.85□□□□□ -0.19
SSBP1-207ENST00000468267 NOTCH1P46531 2555 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 EFCAB10A6NFE3 127 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 VGLL3A8MV65 326 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 SLC33A1O00400 549 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-207ENST00000468267 GABRPO00591 440 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 DEGS1O15121 323 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 ZNF44P15621 663 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 GLIPR1P48060 266 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 AESQ08117 197 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 LDLRAD2Q5SZI1 272 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 SLC35E4Q6ICL7 350 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 BRICD5Q6PL45 260 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 ASCL4Q6XD76 172 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 TRAPPC6BQ86SZ2 158 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 FBLIM1Q8WUP2 373 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 TNFAIP8L1Q8WVP5 186 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 FOXRED1Q96CU9 486 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-207ENST00000468267 GPER1Q99527 375 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 TMEM133Q9H2Q1 129 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 DCLRE1BQ9H816 532 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 PLCXD1Q9NUJ7 323 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 CNOT2Q9NZN8 540 aaKnown RBP13.84□□□□□ -0.19
SSBP1-207ENST00000468267 PSORS1C1Q9UIG5 152 aa13.84□□□□□ -0.19
SSBP1-207ENST00000468267 TRGV10A0A0A0MS01 117 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 XPNPEP2O43895 674 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 CSN2P05814 226 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 DYNC1I2Q13409 638 aaKnown RBP13.83□□□□□ -0.2
SSBP1-207ENST00000468267 Q8NFD4 153 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 OR51T1Q8NGJ9 327 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 COQ2Q96H96 371 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-207ENST00000468267 RAB18Q9NP72 206 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 TMEM138Q9NPI0 162 aa13.83□□□□□ -0.2
SSBP1-207ENST00000468267 IGHV2-26A0A0B4J1V2 119 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 TRBV5-5A0A0J9YX44 114 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 ODAMA1E959 279 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 MMP23AO75900 390 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 PTGFRP43088 359 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 RPS11P62280 158 aaKnown RBP eCLIP13.82□□□□□ -0.2
SSBP1-207ENST00000468267 PPP3R1P63098 170 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 RSU1Q15404 277 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 SSX2Q16385 188 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 KRBOX4Q5JUW0 171 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 MINOS1Q5TGZ0 78 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 HEPN1Q6WQI6 88 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 LIAT1Q6ZQX7 453 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 OR13C5Q8NGS8 318 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 TFAP2CQ92754 450 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 CLEC7AQ9BXN2 247 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 VCXQ9H320 206 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 GAL3ST2Q9H3Q3 398 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 TAS2R3Q9NYW6 316 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 FBLN5Q9UBX5 448 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 MINOS1-NBL1R4GNA1 71 aa13.82□□□□□ -0.2
SSBP1-207ENST00000468267 H0YJX3 145 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 GPX5O75715 221 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 IGFBP3P17936 291 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-207ENST00000468267 BDKRB2P30411 391 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 KIR2DS4P43632 304 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 OR3A4PP47883 348 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 RAB13P51153 203 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 IL13RA2Q14627 380 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 FAM189A2Q15884 450 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 PLA1AQ53H76 456 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 YIF1BQ5BJH7 314 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 PRAMEF5Q5TYX0 476 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 OR52W1Q6IF63 320 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 TREML4Q6UXN2 200 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 ZFP41Q8N8Y5 198 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 BPIFB6Q8NFQ5 453 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 OR10K1Q8NGX5 313 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 ORAI1Q96D31 301 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 PGLYRP3Q96LB9 341 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 FAM192AQ9GZU8 254 aa13.81□□□□□ -0.2
SSBP1-207ENST00000468267 NKX1-2Q9UD57 310 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-207ENST00000468267 TRAV24A0A0B4J272 114 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 MEGF11A6BM72 1044 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 CHST1O43916 411 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 CDRT1O95170 752 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 HTR3BO95264 441 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 CDK2P24941 298 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 C21orf33P30042 268 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-207ENST00000468267 GABRA5P31644 462 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 ZNF93P35789 620 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-207ENST00000468267 TAS2R43P59537 309 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 ATXN7L3Q14CW9 347 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-207ENST00000468267 Q499Y3 187 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 PAN3Q58A45 887 aaKnown RBP13.8□□□□□ -0.2
SSBP1-207ENST00000468267 DDI2Q5TDH0 399 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 BAIAP2L2Q6UXY1 529 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 AHSA2Q719I0 299 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 STX19Q8N4C7 294 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 OR4C13Q8NGP0 309 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 NKX3-1Q99801 234 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-207ENST00000468267 CDCA4Q9BXL8 241 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 PPIL3Q9H2H8 161 aaKnown RBP13.8□□□□□ -0.2
SSBP1-207ENST00000468267 NCOR1P1Q9H4R4 102 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 RANBP3Q9H6Z4 567 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-207ENST00000468267 TCF7L1Q9HCS4 588 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms