RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PTGFRP43088 359 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 CCR9P51686 369 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 SCN1BQ07699 218 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 HLA-DRB5Q30154 266 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 TPTE2P1Q5T6R2 138 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 CCDC144NLQ6NUI1 221 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 CENPNQ96H22 339 aaPredicted RBP18.15■□□□□ 0.5
USP42-205ENST00000465073 OSBPL10Q9BXB5 764 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 NEK6Q9HC98 313 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 OAZ3Q9UMX2 235 aa18.15■□□□□ 0.5
USP42-205ENST00000465073 A0A087X0M5 115 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 A0A1B0GX30 115 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 DAPL1A0PJW8 107 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 FAM172BPA6NC97 362 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 LY6LH3BQJ8 138 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 SLC16A6O15403 523 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 AMY1AP04745 511 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 AMY2AP04746 511 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 NANOS3P60323 173 aaKnown RBP18.14■□□□□ 0.5
USP42-205ENST00000465073 BNIP1Q12981 228 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 KRBOX4Q5JUW0 171 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 C1orf146Q5VVC0 180 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 OR13C3Q8NGS6 347 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 IMPAD1Q9NX62 359 aa18.14■□□□□ 0.5
USP42-205ENST00000465073 J3QRE1 110 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 CLIC3O95833 236 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 HTR1AP08908 422 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 MNDAP41218 407 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 Q6P435 159 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 OR5D18Q8NGL1 313 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 COQ2Q96H96 371 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 SPACA5Q96QH8 159 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 OR6C3Q9NZP0 311 aa18.14■□□□□ 0.49
USP42-205ENST00000465073 KIAA2026Q5HYC2 2103 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 ZNF729A6NN14 1252 aaPredicted RBP18.13■□□□□ 0.49
USP42-205ENST00000465073 SLC33A1O00400 549 aaPredicted RBP18.13■□□□□ 0.49
USP42-205ENST00000465073 DEGS1O15121 323 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 FAM106CPP0CH98 169 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 RASSF2P50749 326 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 SLC25A30Q5SVS4 291 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 OR13C9Q8NGT0 318 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 OR10AC1Q8NH08 325 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 RNFT2Q96EX2 444 aa18.13■□□□□ 0.49
USP42-205ENST00000465073 DNAH3Q8TD57 4116 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 K7EIL1 84 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 OR3A4PP47883 348 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 KHDC1LQ5JSQ8 128 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 RNF144BQ7Z419 303 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 OR51A4Q8NGJ6 313 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 HRASLS5Q96KN8 279 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 ZCCHC4Q9H5U6 513 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 PCDHB16Q9NRJ7 776 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 INPP5EQ9NRR6 644 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 ING3Q9NXR8 418 aa18.12■□□□□ 0.49
USP42-205ENST00000465073 KBTBD11-OT1A0A1B0GTJ5 212 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 SH2D7A6NKC9 451 aaPredicted RBP18.11■□□□□ 0.49
USP42-205ENST00000465073 OR4C45A6NMZ5 311 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 RBM39Q14498 530 aaKnown RBP18.11■□□□□ 0.49
USP42-205ENST00000465073 C17orf58Q2M2W7 97 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 C9orf152Q5JTZ5 239 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 MEDAGQ5VYS4 303 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 C10orf99Q6UWK7 81 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 THNSL2Q86YJ6 484 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 OSR2Q8N2R0 312 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 ACBD7Q8N6N7 88 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 PELI1Q96FA3 418 aa18.11■□□□□ 0.49
USP42-205ENST00000465073 J3QLW9 94 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 RPSAP08865 295 aaKnown RBP18.1■□□□□ 0.49
USP42-205ENST00000465073 TMEM225BP0DP42 221 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 DBTP11182 482 aaKnown RBP18.1■□□□□ 0.49
USP42-205ENST00000465073 ZNF19P17023 458 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 NFYBP25208 207 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 SNRPGP62308 76 aaKnown RBP18.1■□□□□ 0.49
USP42-205ENST00000465073 ALKBH1Q13686 389 aaKnown RBP18.1■□□□□ 0.49
USP42-205ENST00000465073 VAX1Q5SQQ9 334 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 ZNF565Q8N9K5 539 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 OR9G1Q8NH87 305 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 MRPL48Q96GC5 212 aaKnown RBP18.1■□□□□ 0.49
USP42-205ENST00000465073 MYCBPQ99417 103 aaPredicted RBP18.1■□□□□ 0.49
USP42-205ENST00000465073 MYRFQ9Y2G1 1151 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 MOB4Q9Y3A3 225 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 AMMECR1Q9Y4X0 333 aaPredicted RBP18.1■□□□□ 0.49
USP42-205ENST00000465073 HSPE1-MOB4S4R3N1 261 aa18.1■□□□□ 0.49
USP42-205ENST00000465073 SAC3D1A6NKF1 404 aa18.09■□□□□ 0.49
USP42-205ENST00000465073 ATXN7L3Q14CW9 347 aaPredicted RBP18.09■□□□□ 0.49
USP42-205ENST00000465073 CDK5R1Q15078 307 aa18.09■□□□□ 0.49
USP42-205ENST00000465073 OR5D14Q8NGL3 314 aa18.09■□□□□ 0.49
USP42-205ENST00000465073 RPEQ96AT9 228 aa18.09■□□□□ 0.49
USP42-205ENST00000465073 KIRREL1Q96J84 757 aa18.09■□□□□ 0.49
USP42-205ENST00000465073 C4orf36Q96KX1 117 aa18.09■□□□□ 0.49
USP42-205ENST00000465073 PPIL3Q9H2H8 161 aaKnown RBP18.09■□□□□ 0.49
USP42-205ENST00000465073 NCOR1P1Q9H4R4 102 aa18.09■□□□□ 0.49
USP42-205ENST00000465073 FAM90A18PA6NE21 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A16PA6NEW6 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A20PA6NIJ5 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 SNTNA6NMZ2 147 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A9PA6NNJ1 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A12PA8MX19 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 FAM90A5PA8MXJ8 464 aa18.08■□□□□ 0.49
USP42-205ENST00000465073 HCKP08631 526 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms