RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 LEUTXA8MZ59 168 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 E9PQ18 207 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 H3BNX3 289 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 DEGS1O15121 323 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 PRB2P02812 416 aaPredicted RBP16.86■□□□□ 0.29
VSX1-206ENST00000444511 CSN2P05814 226 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 RPSAP08865 295 aaKnown RBP16.86■□□□□ 0.29
VSX1-206ENST00000444511 TMEM225BP0DP42 221 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 CD24P25063 80 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 PTGFRP43088 359 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 KRBOX4Q5JUW0 171 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 SERPINA12Q8IW75 414 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 SYS1Q8N2H4 156 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 OR4D6Q8NGJ1 314 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 OR5D14Q8NGL3 314 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 LIN7BQ9HAP6 207 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 MYRFQ9Y2G1 1151 aa16.86■□□□□ 0.29
VSX1-206ENST00000444511 ADARB2-AS1A8MUL3 147 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 TOR1AO14656 332 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 SULT1B1O43704 296 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 FADS2O95864 444 aaKnown RBP16.85■□□□□ 0.29
VSX1-206ENST00000444511 DBTP11182 482 aaKnown RBP16.85■□□□□ 0.29
VSX1-206ENST00000444511 CEACAM3P40198 252 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 ATXN7L3Q14CW9 347 aaPredicted RBP16.85■□□□□ 0.29
VSX1-206ENST00000444511 KISS1Q15726 138 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 OXLD1Q5BKU9 147 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 Q6P435 159 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 REC114Q7Z4M0 266 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 OR5AU1Q8NGC0 362 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 CREB3L1Q96BA8 519 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 Q96MT0 163 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 OCSTAMPQ9BR26 566 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 ISG20L2Q9H9L3 353 aaKnown RBP16.85■□□□□ 0.29
VSX1-206ENST00000444511 ZNF286AQ9HBT8 521 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 DHDHQ9UQ10 334 aa16.85■□□□□ 0.29
VSX1-206ENST00000444511 TMEM212A6NML5 194 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 SLC33A1O00400 549 aaPredicted RBP16.84■□□□□ 0.29
VSX1-206ENST00000444511 MPZL2O60487 215 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 ZFPL1O95159 310 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 IGLV1-47P01700 117 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 GABRB1P18505 474 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 CD34P28906 385 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 GDNFP39905 211 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 MRPL28Q13084 256 aaKnown RBP16.84■□□□□ 0.29
VSX1-206ENST00000444511 OR5AK2Q8NH90 309 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 TSEN15Q8WW01 171 aaKnown RBP16.84■□□□□ 0.29
VSX1-206ENST00000444511 COQ2Q96H96 371 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 AMBNQ9NP70 447 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 INPP5EQ9NRR6 644 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 OR6C3Q9NZP0 311 aa16.84■□□□□ 0.29
VSX1-206ENST00000444511 A0A1W2PRX2 142 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 ALX3O95076 343 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 CCDC159P0C7I6 412 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 PRRX1P54821 245 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 ZP1P60852 638 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 RBM39Q14498 530 aaKnown RBP16.83■□□□□ 0.28
VSX1-206ENST00000444511 CDK5R1Q15078 307 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 HLA-DRB5Q30154 266 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 FBLN7Q53RD9 439 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 ZNF691Q5VV52 312 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 CENPVQ7Z7K6 275 aaPredicted RBP16.83■□□□□ 0.28
VSX1-206ENST00000444511 PARP16Q8N5Y8 322 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 CPNE2Q96FN4 548 aaPredicted RBP16.83■□□□□ 0.28
VSX1-206ENST00000444511 SLC25A33Q9BSK2 321 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 ERVK13-1Q9NX77 482 aa16.83■□□□□ 0.28
VSX1-206ENST00000444511 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.83■□□□□ 0.28
VSX1-206ENST00000444511 PLXNB1O43157 2135 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 ZNF729A6NN14 1252 aaPredicted RBP16.82■□□□□ 0.28
VSX1-206ENST00000444511 E9PI62 339 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 BUB1B-PAK6H3BSN5 160 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 HSPB6O14558 160 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 OR2F2O95006 317 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 OR3A4PP47883 348 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 MTNR1BP49286 362 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 GBX2P52951 348 aaPredicted RBP16.82■□□□□ 0.28
VSX1-206ENST00000444511 RAB40BQ12829 278 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 ABCA11PQ4W5N1 156 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 TPTE2P1Q5T6R2 138 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 LPCAT4Q643R3 524 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 RHOXF1Q8NHV9 184 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 SGCDQ92629 289 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 NR1H4Q96RI1 486 aaPredicted RBP16.82■□□□□ 0.28
VSX1-206ENST00000444511 PDCD1LG2Q9BQ51 273 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 C9orf16Q9BUW7 83 aa16.82■□□□□ 0.28
VSX1-206ENST00000444511 PPIL3Q9H2H8 161 aaKnown RBP16.82■□□□□ 0.28
VSX1-206ENST00000444511 H0YJX3 145 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 MAGEB3O15480 346 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 LPLP06858 475 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 RAB3AP20336 220 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 NFYBP25208 207 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 MNDAP41218 407 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 GLP1RP43220 463 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 CD83Q01151 205 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 C17orf58Q2M2W7 97 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 PAN3Q58A45 887 aaKnown RBP16.81■□□□□ 0.28
VSX1-206ENST00000444511 CCDC144NLQ6NUI1 221 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 Q6ZPA2 131 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 C10orf67Q8IYJ2 551 aa16.81■□□□□ 0.28
VSX1-206ENST00000444511 RBM14Q96PK6 669 aaKnown RBP16.81■□□□□ 0.28
VSX1-206ENST00000444511 GPER1Q99527 375 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms