RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TMED9Q9BVK6 235 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 UGT2B28Q9BY64 529 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 POMKQ9H5K3 350 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 TMEM27Q9HBJ8 222 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 HEBP1Q9NRV9 189 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 RBM22Q9NW64 420 aaKnown RBP eCLIP1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 BABAM2Q9NXR7 383 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 TAS2R9Q9NYW1 312 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 USE1Q9NZ43 259 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 RBM12B-AS1Q9P1G2 102 aa1.99□□□□□ -2.09
HMGB1P49-201ENST00000418882 C8orf87E5RJ46 101 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 AZIN1O14977 448 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 NDUFS5O43920 106 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 GLSO94925 669 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 EPPINO95925 133 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 ASS1P00966 412 aaKnown RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 PTHP01270 115 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 RPS17P08708 135 aaKnown RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 MMP7P09237 267 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 PVALBP20472 110 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 MYL9P24844 172 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 PRSS3P35030 304 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 LGALS7P47929 136 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 GCLMP48507 274 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 VSX2P58304 361 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 ERVS71-1P61550 626 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 CDK5Q00535 292 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 FAM53BQ14153 422 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 LRRC26Q2I0M4 334 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 HHATQ5VTY9 493 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 SYPL2Q5VXT5 272 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 DNM1P34Q6PK57 102 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 RTL4Q6ZR62 310 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 C10orf107Q8IVU9 208 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 TMEM105Q8N8V8 129 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 C19orf18Q8NEA5 215 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 RXFP4Q8TDU9 374 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 CASTOR1Q8WTX7 329 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 BLNKQ8WV28 456 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 CCL17Q92583 94 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 DCPSQ96C86 337 aaKnown RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 DDIT4LQ96D03 193 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 SMIM19Q96E16 107 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 C9orf16Q9BUW7 83 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 TAPBPLQ9BX59 468 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 TOLLIPQ9H0E2 274 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 FBXL15Q9H469 300 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 HRASLSQ9HDD0 168 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 EMC3Q9P0I2 261 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 DHCR7Q9UBM7 475 aaKnown RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 TRMT112Q9UI30 125 aaKnown RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 SLC7A11Q9UPY5 501 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 TP53TG1Q9Y2A0 90 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 CARHSP1Q9Y2V2 147 aaKnown RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 POLR3HQ9Y535 204 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 ZCCHC6Q5VYS8 1495 aaKnown RBP1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 ZNF407Q9C0G0 2248 aa1.98□□□□□ -2.09
HMGB1P49-201ENST00000418882 NUP153P49790 1475 aaKnown RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 IGHV6-1A0A0B4J1U7 121 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 A0A1W2PQL4 384 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR6C70A6NIJ9 312 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 KRBOX1C9JBD0 128 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 CXCR6O00574 342 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 FFAR1O14842 300 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 PSPHP1O15172 72 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 CRXO43186 299 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 RLN2P04090 185 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 IFNA6P05013 189 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 RPA3P35244 121 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 CAPZBP47756 277 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 AP3S2P59780 193 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 B2MP61769 119 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 DYNLL1P63167 89 aaKnown RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 CRADDP78560 199 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 PRDX1Q06830 199 aaKnown RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 HLA-DRB5Q30154 266 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 MPV17L2Q567V2 206 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 CLEC19AQ6UXS0 136 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 FAM19A5Q7Z5A7 132 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 CPNE9Q8IYJ1 553 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 DRAM1Q8N682 238 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 CCNYL1Q8N7R7 359 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 S100PBPQ96BU1 408 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 PRAP1Q96NZ9 151 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 METTL26Q96S19 204 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 NUDT9Q9BW91 350 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR51E2Q9H255 320 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR51V1Q9H2C8 321 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 MS4A6AQ9H2W1 248 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 METTL8Q9H825 291 aaKnown RBP1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 PLEKHF2Q9H8W4 249 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 RHOFQ9HBH0 211 aa1.97□□□□□ -2.09
HMGB1P49-201ENST00000418882 IGHV3OR16-8A0A075B7F1 116 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 IGKV3D-11A0A0A0MRZ8 115 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 LRRN3E7EW58 273 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 NDUFC2-KCTD14E9PQ53 114 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 SLC16A4O15374 487 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 CCDC22O60826 627 aa1.96□□□□□ -2.1
HMGB1P49-201ENST00000418882 SLC22A5O76082 557 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms