RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 RFPL4AA6NLU0 287 aa13.08□□□□□ -0.31
LRRK1-201ENST00000388948 RFPL4AL1F8VTS6 287 aa13.08□□□□□ -0.31
LRRK1-201ENST00000388948 ZFPL1O95159 310 aa13.08□□□□□ -0.31
LRRK1-201ENST00000388948 REG1BP48304 166 aa13.08□□□□□ -0.31
LRRK1-201ENST00000388948 EVX1P49640 407 aa13.08□□□□□ -0.31
LRRK1-201ENST00000388948 SLC38A11Q08AI6 406 aa13.08□□□□□ -0.31
LRRK1-201ENST00000388948 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 PF4P02776 101 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 C19orf57Q0VDD7 668 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 TCTE3Q8IZS6 198 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF596Q8TC21 504 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 C10orf90Q96M02 699 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 KPTNQ9Y664 436 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 RPL13AP40429 203 aaKnown RBP13.08□□□□□ -0.32
LRRK1-201ENST00000388948 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.32
LRRK1-201ENST00000388948 OR1L1Q8NH94 360 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 NUDT16L1Q9BRJ7 211 aaKnown RBP13.08□□□□□ -0.32
LRRK1-201ENST00000388948 RNF115Q9Y4L5 304 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 PGA3P0DJD8 388 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 RIMKLAQ8IXN7 391 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 GPR27Q9NS67 375 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 CD200P41217 278 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 GP2P55259 537 aaKnown RBP13.08□□□□□ -0.32
LRRK1-201ENST00000388948 FAM162BQ5T6X4 162 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 NCR3LG1Q68D85 454 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 R3HDM4Q96D70 268 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 CNTD2Q9H8S5 307 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 SLC45A2Q9UMX9 530 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 TMED3Q9Y3Q3 217 aa13.08□□□□□ -0.32
LRRK1-201ENST00000388948 WNT3P56703 355 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 DUSP18Q8NEJ0 188 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 ASCL3Q9NQ33 180 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 COL19A1Q14993 1142 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 C4orf17Q53FE4 359 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 SIGLECL1Q8N7X8 197 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 A0A0A6YYJ9 748 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 CRXO43186 299 aaPredicted RBP13.07□□□□□ -0.32
LRRK1-201ENST00000388948 OR52B4Q8NGK2 314 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 C14orf79Q96F83 325 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 FAM87AP0C7U9 286 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 ID1P41134 155 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.32
LRRK1-201ENST00000388948 RNFT1Q5M7Z0 435 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 RASL12Q9NYN1 266 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 PPP1R2P9O14990 202 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 CEACAM1P13688 526 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 FAM219BQ5XKK7 198 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 PIPOXQ9P0Z9 390 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 TMEM210A6NLX4 147 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 IGHA1P01876 353 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 IGHA2P01877 340 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 FAM106CPP0CH98 169 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 TFPI2P48307 235 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 PTTG1IPP53801 180 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF273Q14593 569 aa13.07□□□□□ -0.32
LRRK1-201ENST00000388948 GFRA1P56159 465 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 CLDN20P56880 219 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 DPH3Q96FX2 82 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 TRDCB7Z8K6 153 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF764Q96H86 408 aaPredicted RBP13.06□□□□□ -0.32
LRRK1-201ENST00000388948 RAB40CQ96S21 281 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 RRN3P1Q2M238 152 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 DCTN5Q9BTE1 182 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 CD160O95971 181 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 FGF5P12034 268 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 ATG4DQ86TL0 474 aaPredicted RBP13.06□□□□□ -0.32
LRRK1-201ENST00000388948 TMEM74BQ9NUR3 256 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 LALBAP00709 142 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 PDLIM4P50479 330 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 AESQ08117 197 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 NSUN5P2Q63ZY6 315 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 OR10A7Q8NGE5 316 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 TXNDC12O95881 172 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 CD37P11049 281 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 TSPO2Q5TGU0 170 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 FAM122BQ7Z309 247 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 CABLES2Q9BTV7 478 aa13.06□□□□□ -0.32
LRRK1-201ENST00000388948 YTHDF2Q9Y5A9 579 aaKnown RBP13.06□□□□□ -0.32
LRRK1-201ENST00000388948 SLC7A10Q9NS82 523 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 ADAMTSL1Q8N6G6 1762 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 ACSM4P0C7M7 580 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 PMELP40967 661 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 CDK5Q00535 292 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 GHITMQ9H3K2 345 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 GABRB1P18505 474 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 KIAA0040Q15053 153 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 SLC24A4Q8NFF2 622 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 ZNF721Q8TF20 911 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 SH2D2AQ9NP31 389 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 ARHGEF17Q96PE2 2063 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-201ENST00000388948 TMEM127O75204 238 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 TGFBR1P36897 503 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 PJVKQ0ZLH3 352 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 OR2V2Q96R30 315 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 J3QT63 122 aa13.05□□□□□ -0.32
LRRK1-201ENST00000388948 GEMIN2O14893 280 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms