RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 OCIAD1Q9NX40 245 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 HS3ST3B1Q9Y662 390 aa14.41□□□□□ -0.1
PCDHA1-201ENST00000378133 NPIPA2E9PIF3 369 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 NPIPA3F8WFD2 350 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF728P0DKX0 622 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 DDTP30046 118 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 RRADP55042 308 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 PRSS12P56730 875 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 PKIAP61925 76 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 PPA1Q15181 289 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 RAET1LQ5VY80 246 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 FSCN3Q9NQT6 498 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 GPR173Q9NS66 373 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF850A8MQ14 1090 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 DHHO43323 396 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 ANGPTL7O43827 346 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 SRP19P09132 144 aaKnown RBP14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 FKBP2P26885 142 aaKnown RBP14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 C10orf128Q5T292 105 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 TMEM54Q969K7 222 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 FAAP24Q9BTP7 215 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF700Q9H0M5 742 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 PRO1933Q9H354 126 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 ZNF581Q9P0T4 197 aa14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 NXT1Q9UKK6 140 aaKnown RBP14.4□□□□□ -0.1
PCDHA1-201ENST00000378133 ELOA3CA0A087WX78 387 aaPredicted RBP14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 A0A087X0M5 115 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 A0A1B0GX30 115 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 OR5H1A6NKK0 313 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 TSTD3H0UI37 97 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 CA11O75493 328 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 FABP4P15090 132 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 MTCP1P56278 107 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 FXYD4P59646 89 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 GNMTQ14749 295 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 OR2T2Q6IF00 324 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 SPSB3Q6PJ21 355 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 CCDC54Q8NEL0 328 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 OR2AE1Q8NHA4 323 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 LIPGQ9Y5X9 500 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 FRYLO94915 3013 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 LY6G6EA0A0G2JKS1 128 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 BTBD17A6NE02 478 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 RPL36A-HNRNPH2H7BZ11 118 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 MSTNO14793 375 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 TAF9Q16594 264 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 PHLDA2Q53GA4 152 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 MRPL14Q6P1L8 145 aaKnown RBP14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 LIAT1Q6ZQX7 453 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 SPEM1Q8N4L4 309 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 TVP23CQ96ET8 276 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 U3KQA8 63 aa14.39□□□□□ -0.11
PCDHA1-201ENST00000378133 SPRY1O43609 319 aaPredicted RBP14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 CCL3P10147 92 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 PNLIPP16233 465 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 ATP6V0CP27449 155 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 OTX1P32242 354 aaPredicted RBP14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 EWSR1Q01844 656 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 EIF3IQ13347 325 aaKnown RBP14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 PCOLCEQ15113 449 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 NIPSNAP3BQ9BS92 247 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 SUCNR1Q9BXA5 334 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 SIRT7Q9NRC8 400 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 FAM230AA0A1W2PPH8 454 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 ZNF724A8MTY0 619 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 PTBP3O95758 552 aaKnown RBP14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 OPRM1P35372 400 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 HIST2H3PS2Q5TEC6 136 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 TMEM123Q8N131 208 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 CYB561D1Q8N8Q1 229 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 OR5L1Q8NGL2 311 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 Q96M66 194 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 NECAP2Q9NVZ3 263 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 AK3Q9UIJ7 227 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 WASF3Q9UPY6 502 aa14.38□□□□□ -0.11
PCDHA1-201ENST00000378133 ZIC3O60481 467 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 ONECUT2O95948 504 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 GLIPR1P48060 266 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 CD81P60033 236 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 HIST1H3AP68431 136 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 LRTM2Q8N967 370 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 OR13D1Q8NGV5 346 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 MAFAQ8NHW3 353 aaPredicted RBP14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 POM121Q96HA1 1249 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 ULBP2Q9BZM5 246 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 KIAA1456Q9P272 454 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 FAM24AA6NFZ4 105 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 TRGC1P0CF51 173 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 G0S2P27469 103 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 ZNF266Q14584 549 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 DNLZQ5SXM8 178 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 BRICD5Q6PL45 260 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 C20orf196Q8IYI0 205 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 LGI3Q8N145 548 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 FBXL14Q8N1E6 418 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 NAXEQ8NCW5 288 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 OR14L1PQ8NHC6 308 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 SPTSSAQ969W0 71 aa14.37□□□□□ -0.11
PCDHA1-201ENST00000378133 BOD1Q96IK1 185 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms