RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ATP5L2Q7Z4Y8 100 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 A6NCN8 305 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TRAV38-1A0A0B4J264 116 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 SIRPB1O00241 398 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 DCTN6O00399 190 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 HIST3H3Q16695 136 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 FGF11Q92914 225 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 AMMECR1Q9Y4X0 333 aaPredicted RBP4.33□□□□□ -1.72
PCDH9-201ENST00000377861 AGAP20933 346 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 C5AR2Q9P296 337 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 C5orf52A6NGY3 159 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 C21orf62-AS1Q17RA5 79 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 C8orf44Q96CB5 159 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 AMDHD2Q9Y303 409 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 A0A1W2PPQ1 181 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 LDLRAD4O15165 306 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 GNB3P16520 340 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ATXN7L3Q14CW9 347 aaPredicted RBP4.33□□□□□ -1.72
PCDH9-201ENST00000377861 SLC25A35Q3KQZ1 300 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 SLC25A47Q6Q0C1 308 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TM7SF3Q9NS93 570 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 PSENENQ9NZ42 101 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 AQP7O14520 342 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TSPAN2O60636 221 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF787Q6DD87 383 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ZDHHC11Q9H8X9 412 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 MARCH3Q86UD3 253 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 PPYP01298 95 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM9BQ9NQ34 198 aa4.33□□□□□ -1.72
PCDH9-201ENST00000377861 ROBO4Q8WZ75 1007 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 B3GALT1Q9Y5Z6 326 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OPRK1P41145 380 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 SLC9A3R2Q15599 337 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 BADQ92934 168 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 IGKV3D-11A0A0A0MRZ8 115 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 PGFP49763 221 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 RSRP1Q9BUV0 290 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 KLF2Q9Y5W3 355 aaPredicted RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 CLDN17P56750 224 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 SFRP5Q5T4F7 317 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 BOLLQ8N9W6 283 aaKnown RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 J3QT63 122 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 VMA21Q3ZAQ7 101 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OR13H1Q8NG92 308 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 ULBP3Q9BZM4 244 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 ANAPC10Q9UM13 185 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 CHST1O43916 411 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 NPBWR1P48145 328 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 GABRA4P48169 554 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 MRPL37Q9BZE1 423 aaKnown RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 LPAR5Q9H1C0 372 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 NAT8BQ9UHF3 227 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 LSM5Q9Y4Y9 91 aaKnown RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 ARSAP15289 507 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 C5orf17Q8NAS9 161 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 MENTQ9BUN1 341 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 BGLAPP02818 100 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 TOMM40LQ969M1 308 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 COL16A1Q07092 1604 aaPredicted RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 SLC25A26Q70HW3 274 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 VN1R1Q9GZP7 353 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 MYADML2A6NDP7 307 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 TYMSP04818 313 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 FBXW9Q5XUX1 488 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OR2Z1Q8NG97 314 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OR10G9Q8NGN4 311 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 Q96M66 194 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 LHX9Q9NQ69 397 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 A8MV72 311 aaPredicted RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 SOX8P57073 446 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM130Q8N3G9 435 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OR10V1Q8NGI7 309 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 MBNL1Q9NR56 388 aaKnown RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OR8B12Q8NGG6 310 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM229AB2RXF0 380 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 PLPPR5Q32ZL2 321 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 SLC31A2O15432 143 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 C1orf210Q8IVY1 113 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OR51H1Q8NH63 302 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 ZFP30Q9Y2G7 519 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 GALR1P47211 349 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 CRYBA2P53672 197 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 PRR7Q8TB68 274 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 CXXC4Q9H2H0 198 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 A0A1B0GTH9 108 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 ZIC2O95409 532 aaPredicted RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM215Q68D42 235 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 CENPVQ7Z7K6 275 aaPredicted RBP4.32□□□□□ -1.72
PCDH9-201ENST00000377861 POC1AQ8NBT0 407 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 DMBX1Q8NFW5 382 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 EXTL1Q92935 676 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 CLDN1O95832 211 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 GNG4P50150 75 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 SLC35E4Q6ICL7 350 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 CYP2G1PQ6ZSU1 146 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 HSD17B8Q92506 261 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 ARHGAP5-AS1Q96IT6 56 aa4.32□□□□□ -1.72
PCDH9-201ENST00000377861 ATP6V0BQ99437 205 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms