RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 KCNS2Q9ULS6 477 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 TPRP12270 2363 aaKnown RBP11.17□□□□□ -0.62
USP11-204ENST00000377107 TRBV6-7A0A0A0MS04 114 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 MSTNO14793 375 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 TAAR5O14804 337 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 RAB1AP62820 205 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 FLI1Q01543 452 aaPredicted RBP11.17□□□□□ -0.62
USP11-204ENST00000377107 STK11Q15831 433 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 CXorf66Q5JRM2 361 aaPredicted RBP11.17□□□□□ -0.62
USP11-204ENST00000377107 AVPI1Q5T686 147 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 GGNQ86UU5 652 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 MKXQ8IYA7 352 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 CCDC71LQ8N9Z2 235 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 SIGLEC12Q96PQ1 595 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 ARRDC1-AS1Q9H2J1 176 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 LUZP4Q9P127 313 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 RCC2Q9P258 522 aaKnown RBP11.17□□□□□ -0.62
USP11-204ENST00000377107 EDARQ9UNE0 448 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 PRELID3BQ9Y3B1 194 aa11.17□□□□□ -0.62
USP11-204ENST00000377107 ADAM20O43506 726 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 CRYGSP22914 178 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 CTSSP25774 331 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 NKX2-1P43699 371 aaPredicted RBP11.16□□□□□ -0.62
USP11-204ENST00000377107 PLP2Q04941 152 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 IL34Q6ZMJ4 242 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 DPPA2Q7Z7J5 298 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 GAPTQ8N292 157 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 OR2G3Q8NGZ4 309 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 WFDC1Q9HC57 220 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 KCNJ16Q9NPI9 418 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 CCL28Q9NRJ3 127 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 ZNF716A6NP11 495 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 ZNF14P17017 642 aaPredicted RBP11.16□□□□□ -0.62
USP11-204ENST00000377107 TMEM187Q14656 261 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 SURF2Q15527 256 aaPredicted RBP11.16□□□□□ -0.62
USP11-204ENST00000377107 GUK1Q16774 197 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 TBC1D26Q86UD7 250 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 RNF138Q8WVD3 245 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 IP6K3Q96PC2 410 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 BOKQ9UMX3 212 aaPredicted RBP11.16□□□□□ -0.62
USP11-204ENST00000377107 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 URGCP-MRPS24S4R325 110 aa11.16□□□□□ -0.62
USP11-204ENST00000377107 C3orf85A0A1B0GTC6 90 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 SYNGR1O43759 233 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 OTX1P32242 354 aaPredicted RBP11.15□□□□□ -0.62
USP11-204ENST00000377107 SNRPEP62304 92 aaKnown RBP11.15□□□□□ -0.62
USP11-204ENST00000377107 RUNX1Q01196 453 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.15□□□□□ -0.62
USP11-204ENST00000377107 IL22RA1Q8N6P7 574 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 C12orf57Q99622 126 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 RSRP1Q9BUV0 290 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 SEC11CQ9BY50 192 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 COL4A2P08572 1712 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 NBEAQ8NFP9 2946 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
USP11-204ENST00000377107 RBM11P57052 281 aaKnown RBP11.15□□□□□ -0.62
USP11-204ENST00000377107 ZNF239Q16600 458 aaKnown RBP11.15□□□□□ -0.62
USP11-204ENST00000377107 SSC4DQ8WTU2 575 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 KCNE4Q8WWG9 221 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 NDRG3Q9UGV2 375 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 LRRC3CA6NJW4 275 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 UMAD1C9J7I0 102 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 GLAP06280 429 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 SELEP16581 610 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 SULT1A2P50226 295 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 HIKESHIQ53FT3 197 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 PSMF1Q92530 271 aa11.15□□□□□ -0.62
USP11-204ENST00000377107 SF3B5Q9BWJ5 86 aaKnown RBP11.15□□□□□ -0.62
USP11-204ENST00000377107 hCG_38984A0A1B0GV85 526 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 hCG_1809904A0A1W2PP81 198 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 A0A1W2PR64 198 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 A0A1W2PRV1 198 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 ATXN7O15265 892 aaPredicted RBP11.14□□□□□ -0.63
USP11-204ENST00000377107 MPPED1O15442 326 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 CA6P23280 308 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 RAB13P51153 203 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 B3GALT5-AS1P59052 145 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 PLEKHA2Q9HB19 425 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 TMEM100Q9NV29 134 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 OR14J1Q9UGF5 321 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 COLQQ9Y215 455 aaPredicted RBP11.14□□□□□ -0.63
USP11-204ENST00000377107 CADP27708 2225 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 A6NLC8 198 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
USP11-204ENST00000377107 AWAT1Q58HT5 328 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 FAM24BQ8N5W8 94 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 CPNE4Q96A23 557 aaPredicted RBP11.14□□□□□ -0.63
USP11-204ENST00000377107 SAT2Q96F10 170 aaPredicted RBP11.14□□□□□ -0.63
USP11-204ENST00000377107 ZNF552Q9H707 407 aaPredicted RBP11.14□□□□□ -0.63
USP11-204ENST00000377107 C19orf12Q9NSK7 152 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 PPP1R3CQ9UQK1 317 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 ZNF175Q9Y473 711 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 ECI1P42126 302 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 ATP1A1-AS1Q5TC04 95 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms