RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 UBALD1Q8TB05 177 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 NARS2Q96I59 477 aaKnown RBP13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 KCNIP3Q9Y2W7 256 aa13.66□□□□□ -0.22
CNKSR1-202ENST00000374253 LRP3O75074 770 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 ECI1P42126 302 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 PLEKHN1Q494U1 663 aaPredicted RBP13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 RPL7L1Q6DKI1 246 aaKnown RBP13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 GLRX5Q86SX6 157 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 BAP18Q8IXM2 172 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 OR5A2Q8NGI9 324 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 MOB3AQ96BX8 217 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 TP53RKQ96S44 253 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 MED9Q9NWA0 146 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 PCDHB10Q9UN67 800 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 IFNA21P01568 189 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 TPT1P13693 172 aaKnown RBP13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 HERPUD1Q15011 391 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 VWA1Q6PCB0 445 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 TFAP2EQ6VUC0 442 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 GLYATL2Q8WU03 294 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 CNTNAP3BQ96NU0 1288 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 CNTNAP3Q9BZ76 1288 aa13.65□□□□□ -0.22
CNKSR1-202ENST00000374253 PIEZO2Q9H5I5 2752 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 NUPL2O15504 423 aaKnown RBP13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 STK11Q15831 433 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 SLC38A6Q8IZM9 456 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 SUMF2Q8NBJ7 301 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 OR52M1Q8NGK5 317 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 GMPPAQ96IJ6 420 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 MEMO1Q9Y316 297 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 IGKV1D-13A0A0B4J2D9 117 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 TNFSF12O43508 249 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 APOC3P02656 99 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 IGKV1-13P0DP09 117 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 HKR1P10072 659 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 UBE2NP61088 152 aaKnown RBP13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 BTN1A1Q13410 526 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 TBC1D28Q2M2D7 210 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 ALKBH2Q6NS38 261 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 BSCL2Q96G97 398 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 SLC5A7Q9GZV3 580 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 Q9N2K0 584 aa13.64□□□□□ -0.23
CNKSR1-202ENST00000374253 IGKV1-6A0A0C4DH72 117 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 SLC33A1O00400 549 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 FOXF2Q12947 444 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 HSD17B13Q7Z5P4 300 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 WDR86Q86TI4 376 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 PRR18Q8N4B5 295 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 Q8NFD4 153 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 AQP10Q96PS8 301 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 SHARPINQ9H0F6 387 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 NUP50Q9UKX7 468 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 FZR1Q9UM11 496 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 HSD17B6O14756 317 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 MBPP02686 304 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 LYL1P12980 280 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 ZNF44P15621 663 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 ZNF14P17017 642 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 GNRHRP30968 328 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 GNG3P63215 75 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 CXorf67Q86X51 503 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 C9orf106Q8NAJ2 232 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 PHYHIPLQ96FC7 376 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 DHRS9Q9BPW9 319 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 CADP27708 2225 aa13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 ANKRD11Q6UB99 2663 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-202ENST00000374253 TRAV24A0A0B4J272 114 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 K7EPK0 472 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 SMPD2O60906 423 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 FBXO24O75426 580 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 NAPSAO96009 420 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 PET100P0DJ07 73 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 RPL12P30050 165 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 ATRAIDQ6UW56 229 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 LIAT1Q6ZQX7 453 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 ZNF818PQ6ZRF7 136 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM58AQ8N1B3 248 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM71E2Q8N5Q1 922 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 MSI2Q96DH6 328 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 GP6Q9HCN6 339 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 CACNA1DQ01668 2161 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 H0YL77 283 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 NXPH3O95157 252 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 PPP1CBP62140 327 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 TMEM268Q5VZI3 342 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 GAPTQ8N292 157 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 SLC35G3Q8N808 338 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 BPIFCQ8NFQ6 507 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 STOML3Q8TAV4 291 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 SLC25A40Q8TBP6 338 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 IL1F10Q8WWZ1 152 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 PARP12Q9H0J9 701 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 CDH20Q9HBT6 801 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 LUZP4Q9P127 313 aa13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 RCC2Q9P258 522 aaKnown RBP13.62□□□□□ -0.23
CNKSR1-202ENST00000374253 LHX6Q9UPM6 363 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms