RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SUCNR1Q9BXA5 334 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 Q9N2K0 584 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 TMEM100Q9NV29 134 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 BET1O15155 118 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 NAPSAO96009 420 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 CELA3BP08861 270 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 RCC1P18754 421 aaPredicted RBP16.03■□□□□ 0.16
USP49-202ENST00000373010 LHFPL5Q8TAF8 219 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 C18orf12Q96KH6 178 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 PRRX2Q99811 253 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 OPA3Q9H6K4 179 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 RCC2Q9P258 522 aaKnown RBP16.03■□□□□ 0.16
USP49-202ENST00000373010 K7EPK0 472 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 PHF1O43189 567 aaPredicted RBP16.02■□□□□ 0.16
USP49-202ENST00000373010 MBPP02686 304 aaPredicted RBP16.02■□□□□ 0.16
USP49-202ENST00000373010 FTH1P19P0C7X4 201 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 FAM157CP0CG43 387 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 CA6P23280 308 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 ARHGDIBP52566 201 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 SMCO1Q147U7 214 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 ATRAIDQ6UW56 229 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 P4HA3Q7Z4N8 544 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 FAM71E2Q8N5Q1 922 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 RNF141Q8WVD5 230 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 NARS2Q96I59 477 aaKnown RBP16.02■□□□□ 0.16
USP49-202ENST00000373010 TP53RKQ96S44 253 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 SYT3Q9BQG1 590 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 PIGMQ9H3S5 423 aa16.02■□□□□ 0.16
USP49-202ENST00000373010 CDRT15L2A8MXV6 281 aa16.02■□□□□ 0.15
USP49-202ENST00000373010 DIRAS3O95661 229 aa16.02■□□□□ 0.15
USP49-202ENST00000373010 SOX8P57073 446 aa16.02■□□□□ 0.15
USP49-202ENST00000373010 GCNT2Q8N0V5 402 aa16.02■□□□□ 0.15
USP49-202ENST00000373010 C17orf78Q8N4C9 275 aa16.02■□□□□ 0.15
USP49-202ENST00000373010 NANOS1Q8WY41 292 aaKnown RBP16.02■□□□□ 0.15
USP49-202ENST00000373010 FAM86C1Q9NVL1 165 aa16.02■□□□□ 0.15
USP49-202ENST00000373010 EP300Q09472 2414 aaPredicted RBP16.01■□□□□ 0.15
USP49-202ENST00000373010 AKR1C2P52895 323 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 AKR1C1Q04828 323 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 MPV17LQ2QL34 196 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 CLEC9AQ6UXN8 241 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 LRTM2Q8N967 370 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 FDCSPQ8NFU4 85 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 SMIM3Q9BZL3 60 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 PLSCR2Q9NRY7 297 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 MPC1Q9Y5U8 109 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 OTOGLQ3ZCN5 2332 aa16.01■□□□□ 0.15
USP49-202ENST00000373010 H7C1Q1 480 aa16■□□□□ 0.15
USP49-202ENST00000373010 GALR2O43603 387 aaPredicted RBP16■□□□□ 0.15
USP49-202ENST00000373010 RHBDL1O75783 438 aa16■□□□□ 0.15
USP49-202ENST00000373010 WT1P19544 449 aaPredicted RBP16■□□□□ 0.15
USP49-202ENST00000373010 HERPUD1Q15011 391 aa16■□□□□ 0.15
USP49-202ENST00000373010 MEX3BQ6ZN04 569 aaKnown RBP16■□□□□ 0.15
USP49-202ENST00000373010 Q6ZS49 121 aa16■□□□□ 0.15
USP49-202ENST00000373010 CCDC71LQ8N9Z2 235 aa16■□□□□ 0.15
USP49-202ENST00000373010 GP6Q9HCN6 339 aa16■□□□□ 0.15
USP49-202ENST00000373010 FBXL17Q9UF56 701 aa16■□□□□ 0.15
USP49-202ENST00000373010 AMDHD2Q9Y303 409 aa16■□□□□ 0.15
USP49-202ENST00000373010 ZNF175Q9Y473 711 aa16■□□□□ 0.15
USP49-202ENST00000373010 LOC400499M0QZD8 3231 aa16■□□□□ 0.15
USP49-202ENST00000373010 HS3ST1O14792 307 aa16■□□□□ 0.15
USP49-202ENST00000373010 GNRHRP30968 328 aa16■□□□□ 0.15
USP49-202ENST00000373010 GNG3P63215 75 aa16■□□□□ 0.15
USP49-202ENST00000373010 PXDC1Q5TGL8 231 aa16■□□□□ 0.15
USP49-202ENST00000373010 DPPA2Q7Z7J5 298 aa16■□□□□ 0.15
USP49-202ENST00000373010 CCDC36Q8IYA8 594 aa16■□□□□ 0.15
USP49-202ENST00000373010 LGI3Q8N145 548 aa16■□□□□ 0.15
USP49-202ENST00000373010 SUMF2Q8NBJ7 301 aa16■□□□□ 0.15
USP49-202ENST00000373010 OR52M1Q8NGK5 317 aa16■□□□□ 0.15
USP49-202ENST00000373010 SECTM1Q8WVN6 248 aa16■□□□□ 0.15
USP49-202ENST00000373010 GPHA2Q96T91 129 aa16■□□□□ 0.15
USP49-202ENST00000373010 MPPED1O15442 326 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 ZNF573Q86YE8 665 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 RDH5Q92781 318 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 BSCL2Q96G97 398 aaPredicted RBP15.99■□□□□ 0.15
USP49-202ENST00000373010 GMPPAQ96IJ6 420 aaPredicted RBP15.99■□□□□ 0.15
USP49-202ENST00000373010 TAF9BQ9HBM6 251 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 LHX6Q9UPM6 363 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 IGKV1-6A0A0C4DH72 117 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 LOC105371267A0A1B0GV96 52 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 ZNF705EA8MWA4 302 aaPredicted RBP15.99■□□□□ 0.15
USP49-202ENST00000373010 CDK2AP1O14519 115 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 TAAR5O14804 337 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 IGHV1-2P23083 117 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 CD82P27701 267 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 TMEM33P57088 247 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 MST1LQ2TV78 715 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 SPIN3Q5JUX0 258 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 C20orf204Q6ZNR8 217 aa15.99■□□□□ 0.15
USP49-202ENST00000373010 IGKV1D-13A0A0B4J2D9 117 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 C3orf85A0A1B0GTC6 90 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 OR5B21A6NL26 309 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 PRSS44E7EML9 344 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 NUPL2O15504 423 aaKnown RBP15.98■□□□□ 0.15
USP49-202ENST00000373010 LYZL6O75951 148 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 TK1P04183 234 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 IGKV1-13P0DP09 117 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 ZNF14P17017 642 aaPredicted RBP15.98■□□□□ 0.15
USP49-202ENST00000373010 IDH3GP51553 393 aaPredicted RBP15.98■□□□□ 0.15
USP49-202ENST00000373010 ERVS71-1P61550 626 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 DEFA5Q01523 94 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms