RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RTN4IP1Q8WWV3 396 aaPredicted RBP14.25□□□□□ -0.13
SAMM50-201ENST00000350028 PHYHIPLQ96FC7 376 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 RSRP1Q9BUV0 290 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 SLC25A32Q9H2D1 315 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 IFT22Q9H7X7 185 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 LAMA5O15230 3695 aa14.25□□□□□ -0.13
SAMM50-201ENST00000350028 DOCK7Q96N67 2140 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 TRBV6-6A0A0A6YYG2 114 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 DIRAS3O95661 229 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 IGKV3-15P01624 115 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 RLN2P04090 185 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 CTXN2P0C2S0 81 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 TUBG1P23258 451 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 TMEM187Q14656 261 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 BEX5Q5H9J7 111 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 FAM76BQ5HYJ3 339 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 THOC7Q6I9Y2 204 aaKnown RBP14.24□□□□□ -0.13
SAMM50-201ENST00000350028 ZNF585AQ6P3V2 769 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 Q6ZS92 163 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 PDZD9Q8IXQ8 264 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 Q8IYB0 196 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 C17orf78Q8N4C9 275 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 SUMF2Q8NBJ7 301 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 CCDC120Q96HB5 630 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 ZNF471Q9BX82 626 aaPredicted RBP14.24□□□□□ -0.13
SAMM50-201ENST00000350028 OBP2BQ9NPH6 170 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 TUBG2Q9NRH3 451 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 IL36RNQ9UBH0 155 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 PROCRQ9UNN8 238 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 POLDIP2Q9Y2S7 368 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 hCG_1807616A0A1W2PRN6 198 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 TRDCB7Z8K6 153 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 PPYP01298 95 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 LUMP51884 338 aaPredicted RBP14.24□□□□□ -0.13
SAMM50-201ENST00000350028 FOXF2Q12947 444 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 TSC22D1Q15714 1073 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 FAM185AQ8N0U4 392 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 ZNF488Q96MN9 340 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 SLC2A9Q9NRM0 540 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 DNAJB11Q9UBS4 358 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 DKK4Q9UBT3 224 aa14.24□□□□□ -0.13
SAMM50-201ENST00000350028 CEP295Q9C0D2 2601 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 A0A1B0GW55 424 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 MBD3L4A6NDZ8 208 aaPredicted RBP14.23□□□□□ -0.13
SAMM50-201ENST00000350028 MBD3L3A6NE82 208 aaPredicted RBP14.23□□□□□ -0.13
SAMM50-201ENST00000350028 MBD3L5A6NJ08 208 aaPredicted RBP14.23□□□□□ -0.13
SAMM50-201ENST00000350028 POM121CA8CG34 1229 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 F5H0A9 414 aaPredicted RBP14.23□□□□□ -0.13
SAMM50-201ENST00000350028 ZNF205O95201 554 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 PDGFAP04085 211 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 TK1P04183 234 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUX4L2P0CJ85 424 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUX4L3P0CJ86 424 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUX4L4P0CJ87 422 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUX4L5P0CJ88 424 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUX4L6P0CJ89 424 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUX4L7P0CJ90 424 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUSP1P28562 367 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 RAB32Q13637 225 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 IAH1Q2TAA2 248 aaPredicted RBP14.23□□□□□ -0.13
SAMM50-201ENST00000350028 IGSF11Q5DX21 431 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 OR5T2Q8NGG2 359 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 MBD3L2Q8NHZ7 208 aaPredicted RBP14.23□□□□□ -0.13
SAMM50-201ENST00000350028 RASL12Q9NYN1 266 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 GSKIPQ9P0R6 139 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 DUX4Q9UBX2 424 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 PFDN2Q9UHV9 154 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 WASF3Q9UPY6 502 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 ATP23Q9Y6H3 246 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 LOC400499M0QZD8 3231 aa14.23□□□□□ -0.13
SAMM50-201ENST00000350028 I3L521 148 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 WDR1O75083 606 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 SPINK2P20155 84 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 ERVS71-1P61550 626 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 PSG7Q13046 419 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 P2RY6Q15077 328 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 PHLDA2Q53GA4 152 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 TOR2AQ5JU69 321 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 GGNBP1Q5YKI7 109 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 LIAT1Q6ZQX7 453 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 ZNF610Q8N9Z0 462 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 AQP10Q96PS8 301 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 ADAT1Q9BUB4 502 aaKnown RBP14.22□□□□□ -0.13
SAMM50-201ENST00000350028 OR5AC2Q9NZP5 309 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 TUBD1Q9UJT1 453 aa14.22□□□□□ -0.13
SAMM50-201ENST00000350028 TRAV24A0A0B4J272 114 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 TMEM210A6NLX4 147 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 DEGS1O15121 323 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 KLK10O43240 276 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 RHBDL1O75783 438 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 TNFSF13O75888 250 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 AGFG2O95081 481 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 CGAP01215 116 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 OR5AC1P0C628 307 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 NAAAQ02083 359 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 WDR86Q86TI4 376 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 LGI3Q8N145 548 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 SCCPDHQ8NBX0 429 aa14.21□□□□□ -0.13
SAMM50-201ENST00000350028 MRPL30Q8TCC3 161 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms