RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 KIAA2026Q5HYC2 2103 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 CACNA1DQ01668 2161 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 IGKV3D-15A0A087WSY6 115 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 ANKRD30BLA7E2S9 258 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 TK1P04183 234 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF44P15621 663 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 SRSF6Q13247 344 aaKnown RBP9.92□□□□□ -0.82
PTPN2-201ENST00000309660 TFAP2EQ6VUC0 442 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 TP53RKQ96S44 253 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 NKX6-2Q9C056 277 aaPredicted RBP9.92□□□□□ -0.82
PTPN2-201ENST00000309660 FBXO9Q9UK97 447 aaPredicted RBP9.92□□□□□ -0.82
PTPN2-201ENST00000309660 CAV2P51636 162 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 CCL11P51671 97 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF616Q08AN1 781 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF273Q14593 569 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM187Q14656 261 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 DHRS11Q6UWP2 260 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 HSD17B11Q8NBQ5 300 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 GLYATL2Q8WU03 294 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 MAGT1Q9H0U3 335 aa9.92□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM218A2RU14 115 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 DEDDO75618 318 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 IDH3GP51553 393 aaPredicted RBP9.91□□□□□ -0.82
PTPN2-201ENST00000309660 KRTAP27-1Q3LI81 207 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 RNFT1Q5M7Z0 435 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 EIF5AL1Q6IS14 154 aaKnown RBP9.91□□□□□ -0.82
PTPN2-201ENST00000309660 SLC35G3Q8N808 338 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 LHFPL5Q8TAF8 219 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM9BQ9NQ34 198 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 LPAR3Q9UBY5 353 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 SLC22A20A6NK97 555 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 TERTO14746 1132 aaKnown RBP9.91□□□□□ -0.82
PTPN2-201ENST00000309660 GNRHRP30968 328 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 LPAR6P43657 344 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 ASCL4Q6XD76 172 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 LIAT1Q6ZQX7 453 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 LGI3Q8N145 548 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 ADAMTS17Q8TE56 1095 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 DNAJB11Q9UBS4 358 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 TRGV5A0A0B4J1U4 118 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 PQLC2LA1A4F0 135 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 PRH1P02810 166 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 SELEP16581 610 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 EIF5AP63241 154 aaKnown RBP9.91□□□□□ -0.82
PTPN2-201ENST00000309660 NAAAQ02083 359 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 IL15RAQ13261 267 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 CEACAM21Q3KPI0 293 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF766Q5HY98 468 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 MDP1Q86V88 176 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF695Q8IW36 515 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 CCDC71LQ8N9Z2 235 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 SPSB4Q96A44 273 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 MOB3AQ96BX8 217 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 POM121L2Q96KW2 1035 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 LINC00470Q9BZP3 86 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 GLS2Q9UI32 602 aa9.91□□□□□ -0.82
PTPN2-201ENST00000309660 RBM7Q9Y580 266 aaKnown RBP9.91□□□□□ -0.82
PTPN2-201ENST00000309660 DIDO1Q9BTC0 2240 aaKnown RBP9.9□□□□□ -0.82
PTPN2-201ENST00000309660 PTPRZ1P23471 2315 aaPredicted RBP9.9□□□□□ -0.82
PTPN2-201ENST00000309660 RHBDL1O75783 438 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 LYZL6O75951 148 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 ARR3P36575 388 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 NHLH2Q02577 135 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 CLINT1Q14677 625 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 Q6ZRG5 221 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 COLCA1Q6ZS62 124 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 CNEP1R1Q8N9A8 125 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 OR4A4PQ8NGN8 299 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 C3orf85A0A1B0GTC6 90 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 RPL36A-HNRNPH2H7BZ11 118 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 TOR1AO14656 332 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 NME2P1O60361 137 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 ATG12O94817 140 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 CELA3BP08861 270 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 CD80P33681 288 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM211Q6ICI0 200 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 DPPA2Q7Z7J5 298 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 PUSL1Q8N0Z8 303 aaKnown RBP9.9□□□□□ -0.82
PTPN2-201ENST00000309660 GAPTQ8N292 157 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 TECTBQ96PL2 329 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 TLNRD1Q9H1K6 362 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 RHOFQ9HBH0 211 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 FAM86C1Q9NVL1 165 aa9.9□□□□□ -0.82
PTPN2-201ENST00000309660 NKX2-8O15522 239 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 FGF16O43320 207 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 C1QL1O75973 258 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 FAM157CP0CG43 387 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 EPHA1P21709 976 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 WNT5AP41221 380 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 FGF12P61328 243 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 RNPS1Q15287 305 aaKnown RBP9.9□□□□□ -0.83
PTPN2-201ENST00000309660 TBC1D26Q86UD7 250 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 OR51H1Q8NH63 302 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 SUCNR1Q9BXA5 334 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 IL36GQ9NZH8 169 aa9.9□□□□□ -0.83
PTPN2-201ENST00000309660 MEX3AA1L020 520 aaKnown RBP9.89□□□□□ -0.83
PTPN2-201ENST00000309660 NKX2-6A6NCS4 301 aa9.89□□□□□ -0.83
PTPN2-201ENST00000309660 MPPED1O15442 326 aa9.89□□□□□ -0.83
PTPN2-201ENST00000309660 ST8SIA3O43173 380 aa9.89□□□□□ -0.83
PTPN2-201ENST00000309660 SLC34A2O95436 690 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms