RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TLE4Q04727 773 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 OR10G3Q8NGC4 313 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 Q96M66 194 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 ELOA3CA0A087WX78 387 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-201ENST00000300527 TLX3O43711 291 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-201ENST00000300527 TESK1Q15569 626 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 RPUSD4Q96CM3 377 aaKnown RBP12.73□□□□□ -0.37
COL6A2-201ENST00000300527 C18orf12Q96KH6 178 aa12.73□□□□□ -0.37
COL6A2-201ENST00000300527 PNRC2Q9NPJ4 139 aaKnown RBP12.73□□□□□ -0.37
COL6A2-201ENST00000300527 PROB1E7EW31 1015 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 CLN3Q13286 438 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
COL6A2-201ENST00000300527 TMED3Q9Y3Q3 217 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 EREGO14944 169 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 IAPPP10997 89 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 LBX1P52954 281 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 TBC1D26Q86UD7 250 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 IL22RA1Q8N6P7 574 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 M1APQ8TC57 530 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 OR14J1Q9UGF5 321 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 XKRY2A2RUG3 117 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 FGF7P21781 194 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 GALNSP34059 522 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 MLF1P58340 268 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 CRIP3Q6Q6R5 217 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 ZNF664Q8N3J9 261 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 OR51H1Q8NH63 302 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 CLDND2Q8NHS1 167 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 PIGCQ92535 297 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 TWSG1Q9GZX9 223 aa12.72□□□□□ -0.37
COL6A2-201ENST00000300527 A0A1W2PPQ1 181 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 MPPED1O15442 326 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 IFNA5P01569 189 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 SLC25A47Q6Q0C1 308 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 ZNF66Q6ZN08 573 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 VSIRQ9H7M9 311 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 PLA2G3Q9NZ20 509 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 TMEM50AO95807 157 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 Q6ZS52 159 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 PLK3Q9H4B4 646 aa12.71□□□□□ -0.37
COL6A2-201ENST00000300527 DIDO1Q9BTC0 2240 aaKnown RBP12.71□□□□□ -0.38
COL6A2-201ENST00000300527 PPYP01298 95 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF16P17020 682 aaPredicted RBP12.71□□□□□ -0.38
COL6A2-201ENST00000300527 MSR1P21757 451 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 P2RY6Q15077 328 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 PHYHD1Q5SRE7 291 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 BEND4Q6ZU67 534 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 GJC3Q8NFK1 279 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF837Q96EG3 531 aaPredicted RBP12.71□□□□□ -0.38
COL6A2-201ENST00000300527 SLC7A10Q9NS82 523 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 CBLN4Q9NTU7 201 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 ARHGAP21Q5T5U3 1957 aa12.71□□□□□ -0.38
COL6A2-201ENST00000300527 FOXI3A8MTJ6 420 aaPredicted RBP12.7□□□□□ -0.38
COL6A2-201ENST00000300527 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
COL6A2-201ENST00000300527 COL10A1Q03692 680 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
COL6A2-201ENST00000300527 MALLQ13021 153 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 OR4X1Q8NH49 305 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 SCGB1C1Q8TD33 95 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
COL6A2-201ENST00000300527 SIRT7Q9NRC8 400 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 C9J4A7 227 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 PITX3O75364 302 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 AMBPP02760 352 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 VEGFBP49765 207 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 PMS2P11Q13670 270 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 RTP5Q14D33 572 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF506Q5JVG8 444 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 GPR137CQ8N3F9 429 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 OR4D5Q8NGN0 318 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 PP6455Q8WZ26 134 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 FAM131CQ96AQ9 280 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 DDA1Q9BW61 102 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 TM2D1Q9BX74 207 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF407Q9C0G0 2248 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 TRDCB7Z8K6 153 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 RRP8O43159 456 aaKnown RBP12.7□□□□□ -0.38
COL6A2-201ENST00000300527 SCGB1D1O95968 90 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 BMP5P22003 454 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 BATFQ16520 125 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 C9orf50Q5SZB4 431 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 KIAA0895LQ68EN5 471 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 RTL6Q6ICC9 239 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 GAPTQ8N292 157 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 UCN2Q96RP3 112 aa12.7□□□□□ -0.38
COL6A2-201ENST00000300527 IGKV1-27A0A075B6S5 117 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 GZMBP10144 247 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 CCNOP22674 350 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 MAS1LP35410 378 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 RPS16P62249 146 aaKnown RBP12.69□□□□□ -0.38
COL6A2-201ENST00000300527 SLC35E3Q7Z769 313 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 ZNF100Q8IYN0 542 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 SNIP1Q8TAD8 396 aaKnown RBP12.69□□□□□ -0.38
COL6A2-201ENST00000300527 POC1BQ8TC44 478 aa12.69□□□□□ -0.38
COL6A2-201ENST00000300527 GNPNAT1Q96EK6 184 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-201ENST00000300527 AURKAIP1Q9NWT8 199 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms