RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 IL33O95760 270 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 MPIG6BO95866 241 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 CSNK2A1P68400 391 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 FBXL14Q8N1E6 418 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 CSNK2A3Q8NEV1 391 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 OR5L2Q8NGL0 311 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 RHBDD1Q8TEB9 315 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 ORAOV1Q8WV07 137 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 THRSPQ92748 146 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 KTI12Q96EK9 354 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 CLUHP3Q96NS8 147 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 CSTL1Q9H114 145 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 RBKSQ9H477 322 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF665Q9H7R5 613 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF703Q9H7S9 590 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 TMEM14AQ9Y6G1 99 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 A0A0U1RQV5 110 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 CD46P15529 392 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 HIST1H1DP16402 221 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 SNU13P55769 128 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 HIST1H3AP68431 136 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 MGAT2Q10469 447 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 PNRC1Q12796 327 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 IL24Q13007 206 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 PRICKLE4Q2TBC4 344 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 EMG1Q92979 244 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 LYRM4Q9HD34 91 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 GPR84Q9NQS5 396 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 HHLA2Q9UM44 414 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 C19orf53Q9UNZ5 99 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 KIAA2026Q5HYC2 2103 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 KIR2DS5A0A0G2JLQ3 304 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 A0A0G2JNG1 304 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 MEGF11A6BM72 1044 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 TGFBR3LH3BV60 316 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 KIR2DS3K7RE56 304 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 H2BFMP0C1H6 154 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 GCH1P30793 250 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 CNN1P51911 297 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 KIR2DS5Q14953 304 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 GPR157Q5UAW9 335 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 ERASQ7Z444 233 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 AGBL5Q8NDL9 886 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 PTPMT1Q8WUK0 201 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 TECTBQ96PL2 329 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 TUBG2Q9NRH3 451 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 C14orf166Q9Y224 244 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 CACNA1IQ9P0X4 2223 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 A0A1W2PPC4 97 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 IGSF23A1L1A6 192 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 MPZL1O95297 269 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 GPR75O95800 540 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 BGLAPP02818 100 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 GALR1P47211 349 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 RPL18Q07020 188 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 OOSP2Q86WS3 158 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 SLC24A4Q8NFF2 622 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 KLHDC7BQ96G42 594 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 SCGB3A2Q96PL1 93 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 GPR27Q9NS67 375 aa13.67□□□□□ -0.22
CTDSP1-201ENST00000273062 HSBP1L1C9JCN9 74 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 SLC33A1O00400 549 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 ONECUT2O95948 504 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF10P21506 573 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 CCR5P51681 352 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 PSG6Q00889 435 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 ARFRP1Q13795 201 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 OR8G5Q8NG78 346 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 ADAT3Q96EY9 351 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 NUDT11Q96G61 164 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 BOD1Q96IK1 185 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 CCDC163A0A0D9SF12 145 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 TMEM14DPA8MWL7 114 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 IGLV3-19P01714 112 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 PLA2G5P39877 138 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 FGF8P55075 233 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 DPPA3Q6W0C5 159 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 TSTD1Q8NFU3 115 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 VAMP8Q9BV40 100 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 FOXQ1Q9C009 403 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 TMEM106BQ9NUM4 274 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 HIF3AQ9Y2N7 669 aa13.66□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF320A2RRD8 509 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 PRKNO60260 465 aaPredicted RBP13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 FAM3BP58499 235 aaPredicted RBP13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 FOXK1P85037 733 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF92Q03936 586 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 NNATQ16517 81 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 TMEM241Q24JQ0 296 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 SULF2Q8IWU5 870 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 SAXO1Q8IYX7 474 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 ARHGEF39Q8N4T4 335 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 OR52R1Q8NGF1 315 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 SNIP1Q8TAD8 396 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF524Q96C55 264 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 C8orf44Q96CB5 159 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 ABHD6Q9BV23 337 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms