RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 COX5AP20674 150 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 AADACP22760 399 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUSP1P28562 367 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 KIR2DS4P43632 304 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 KIR2DS1Q14954 304 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 IAH1Q2TAA2 248 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 IGFL3Q6UXB1 125 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 SUMF2Q8NBJ7 301 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 GTF3AQ92664 365 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 BOD1Q96IK1 185 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 CXorf58Q96LI9 332 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 ZNF488Q96MN9 340 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 TAAR6Q96RI8 345 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 RSRP1Q9BUV0 290 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 SLC2A9Q9NRM0 540 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DUX4Q9UBX2 424 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 H0YIZ8 118 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 DIRAS3O95661 229 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 TK1P04183 234 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 GLAP06280 429 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 EIF2S3P41091 472 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 UCP2P55851 309 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 S100A10P60903 97 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 IL15RAQ13261 267 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 RAB32Q13637 225 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 TSC22D1Q15714 1073 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 PHLDA2Q53GA4 152 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 IGSF11Q5DX21 431 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 ZNF585AQ6P3V2 769 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 Q8IYB0 196 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 OR1J1Q8NGS3 322 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 SLC25A40Q8TBP6 338 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 RBPMSQ93062 196 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 PLSCR4Q9NRQ2 329 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 POLDIP2Q9Y2S7 368 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 SESN1Q9Y6P5 492 aa11.04□□□□□ -0.64
SPTLC1-201ENST00000262554 CELSR3Q9NYQ7 3312 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 KCNAB3O43448 404 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 OR5AC1P0C628 307 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 ERVS71-1P61550 626 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 TMEM187Q14656 261 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 GGNBP1Q5YKI7 109 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 UNQ6126/PRO20091Q6UXV3 157 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 FAM185AQ8N0U4 392 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 ADAT1Q9BUB4 502 aaKnown RBP11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 IFT22Q9H7X7 185 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 SDHAF2Q9NX18 166 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 RASL12Q9NYN1 266 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 OR5AC2Q9NZP5 309 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 DNAJB11Q9UBS4 358 aa11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 URB1O60287 2271 aaKnown RBP11.03□□□□□ -0.64
SPTLC1-201ENST00000262554 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 HS3ST1O14792 307 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 RHBDL1O75783 438 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 IGKV3-15P01624 115 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 CTXN2P0C2S0 81 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 SPINK2P20155 84 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 FOXF2Q12947 444 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 SP6Q3SY56 376 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 FAM76BQ5HYJ3 339 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 LRTM2Q8N967 370 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 WDR31Q8NA23 367 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 MRPL24Q96A35 216 aaKnown RBP11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 RRNAD1Q96FB5 475 aaKnown RBP11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 AQP10Q96PS8 301 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 C1QTNF6Q9BXI9 259 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 TUBD1Q9UJT1 453 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 PROCRQ9UNN8 238 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 ATP23Q9Y6H3 246 aa11.02□□□□□ -0.64
SPTLC1-201ENST00000262554 TRBV6-6A0A0A6YYG2 114 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 MFSD2BA6NFX1 497 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 DEGS1O15121 323 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 BET1O15155 118 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 WDR1O75083 606 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 AGFG2O95081 481 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 F12P00748 615 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 SCTP09683 121 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 PSG7Q13046 419 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 SMCO1Q147U7 214 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 LGI3Q8N145 548 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 C17orf78Q8N4C9 275 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF565Q8N9K5 539 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 SCCPDHQ8NBX0 429 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 RELL2Q8NC24 303 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 OR1S1Q8NH92 325 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 STOML3Q8TAV4 291 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 MRPL30Q8TCC3 161 aaKnown RBP11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 RDH5Q92781 318 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 CNTNAP3BQ96NU0 1288 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 REG4Q9BYZ8 158 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 CNTNAP3Q9BZ76 1288 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 DKK4Q9UBT3 224 aa11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 FBXO9Q9UK97 447 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-201ENST00000262554 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 TRAV24A0A0B4J272 114 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 SHOXO15266 292 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms