RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 UFC1Q9Y3C8 167 aa16.43■□□□□ 0.22
SMARCC1-201ENST00000254480 ERVS71-1P61550 626 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 NSUN5P2Q63ZY6 315 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 C12orf57Q99622 126 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 SLC52A3Q9NQ40 469 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 TRAV38-1A0A0B4J264 116 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 TRAV34A0A0B4J273 112 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 ANKRD20A5PA0PJZ0 165 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 FOXS1O43638 330 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 CSN3P07498 182 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 KCNJ3P48549 501 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 LIAT1Q6ZQX7 453 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 GPA33Q99795 319 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 ICE1Q9Y2F5 2266 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 OR5B21A6NL26 309 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 KCNAB3O43448 404 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 TMEM33P57088 247 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 OR2M3Q8NG83 312 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 OR6C3Q9NZP0 311 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 C1orf53Q5VUE5 145 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 A0A1W2PN81 502 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 CCL21O00585 134 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 IGKV1D-16P01601 117 aa16.42■□□□□ 0.22
SMARCC1-201ENST00000254480 NEURL1O76050 574 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 CD200P41217 278 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 SLC22A18ASQ8N1D0 253 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 BMPR1BO00238 502 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 F2RL2O00254 374 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 SP1P08047 785 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 GABRA1P14867 456 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 CLEC18BQ6UXF7 455 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 MDP1Q86V88 176 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 OR8B3Q8NGG8 313 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 OR8B2Q96RD0 313 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 CHST1O43916 411 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 ZNF561Q8N587 486 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 ADAD2Q8NCV1 583 aaKnown RBP16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 DPF1Q92782 380 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 ANXA10Q9UJ72 324 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 MPC1Q9Y5U8 109 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 TRDCB7Z8K6 153 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 LANCL1O43813 399 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 TMUB1Q9BVT8 246 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 STARD10Q9Y365 291 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 HPXP02790 462 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 SPP1P10451 314 aa16.41■□□□□ 0.22
SMARCC1-201ENST00000254480 HOXC8P31273 242 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 TOMM20LQ6UXN7 152 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 NUFIP2Q7Z417 695 aaKnown RBP16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 FLYWCH2Q96CP2 140 aaKnown RBP16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 WDR61Q9GZS3 305 aaKnown RBP16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 CCL27Q9Y4X3 112 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 ASXL3Q9C0F0 2248 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 PIK3IP1Q96FE7 263 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 PCGF1Q9BSM1 259 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 ATXN7O15265 892 aaPredicted RBP16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 OR2J1Q9GZK6 312 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 LIFP15018 202 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 EFNB2P52799 333 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 FAM78BQ5VT40 261 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 RFLNBQ8N5W9 214 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 MMP26Q9NRE1 261 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 AMMECR1Q9Y4X0 333 aaPredicted RBP16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 CCL8P80075 99 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 TMEM241Q24JQ0 296 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 SLC25A30Q5SVS4 291 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 OR10A7Q8NGE5 316 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 EAF1Q96JC9 268 aaPredicted RBP16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 RSRP1Q9BUV0 290 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 TTTY12Q9BZ98 90 aa16.4■□□□□ 0.22
SMARCC1-201ENST00000254480 POLR2AP24928 1970 aaKnown RBP16.39■□□□□ 0.22
SMARCC1-201ENST00000254480 CXCL3P19876 107 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 UBE2L3P68036 154 aaKnown RBP16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 PRSS42Q7Z5A4 293 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 OR52L2PQ8NGH6 319 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 ZNF721Q8TF20 911 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 MRGPRFQ96AM1 343 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 LIPGQ9Y5X9 500 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 ARAP2Q8WZ64 1704 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 C5orf67F2Z3F1 127 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 ETFRF1Q6IPR1 90 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 ADAT3Q96EY9 351 aaPredicted RBP16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 PARD6AQ9NPB6 346 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 AMDHD2Q9Y303 409 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 TCRBV16S1A1N1A0A5B0 115 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 KLHDC2Q9Y2U9 406 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 SVILO95425 2214 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 FCN1O00602 326 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 BGLAPP02818 100 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 HTR1DP28221 377 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 DUSP15Q9H1R2 295 aaPredicted RBP16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 SLC45A2Q9UMX9 530 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 A0A1W2PQD3 144 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 UPK3AO75631 287 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 CEACAM3P40198 252 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 SRD5A3Q9H8P0 318 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 AURKAIP1Q9NWT8 199 aaPredicted RBP16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 WASHC3Q9Y3C0 194 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 UNC13CQ8NB66 2214 aa16.39■□□□□ 0.21
SMARCC1-201ENST00000254480 LGALS7P47929 136 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms