RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PPP1R35Q8TAP8 253 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 LGALS14Q8TCE9 139 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 ACOT12Q8WYK0 555 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 FAM46BQ96A09 425 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 NCOR1P1Q9H4R4 102 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 CCDC59Q9P031 241 aaKnown RBP11.7□□□□□ -0.54
VPS25-201ENST00000253794 SLC25A10Q9UBX3 287 aaPredicted RBP11.7□□□□□ -0.54
VPS25-201ENST00000253794 SPATA2Q9UM82 520 aa11.7□□□□□ -0.54
VPS25-201ENST00000253794 ACANP16112 2415 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.545e-7■■□□□ 14.5
VPS25-201ENST00000253794 TRBV23-1A0A0A0MS06 115 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 SIRPB1O00241 398 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 OR7C1O76099 320 aaPredicted RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 MSMBP08118 114 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 SNRPBP14678 240 aaKnown RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 ZNF44P15621 663 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 ZNF182P17025 639 aaPredicted RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 ZFP36P26651 326 aaKnown RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 CHATP28329 748 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 ERP29P30040 261 aaKnown RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 EFNB2P52799 333 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 SNU13P55769 128 aaKnown RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 GNB2P62879 340 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 PLA2G7Q13093 441 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 BIVMQ86UB2 503 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 MAPK1IP1LQ8NDC0 245 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 LY6G5BQ8NDX9 201 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 TMEM185AQ8NFB2 350 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 DGCR14Q96DF8 476 aaKnown RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 MSI2Q96DH6 328 aaKnown RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 NUDT16L1Q9BRJ7 211 aaKnown RBP11.69□□□□□ -0.54
VPS25-201ENST00000253794 DCTN5Q9BTE1 182 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 ZNF581Q9P0T4 197 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 HSF4Q9ULV5 492 aa11.69□□□□□ -0.54
VPS25-201ENST00000253794 TRAV20A0A0B4J274 112 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 A6NHS1 94 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 MGST3O14880 152 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 PDCD6O75340 191 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 SCGNO76038 276 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 PAHP00439 452 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 INHBBP09529 407 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 CD99P14209 185 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 FUT3P21217 361 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 GABRR1P24046 479 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 FOXB2Q5VYV0 432 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 CYB5R2Q6BCY4 276 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 GAPTQ8N292 157 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 ASCC1Q8N9N2 400 aaKnown RBP11.68□□□□□ -0.54
VPS25-201ENST00000253794 SUMF2Q8NBJ7 301 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 OR56B1Q8NGI3 324 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 AP3S1Q92572 193 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 SLC25A38Q96DW6 304 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 NICN1Q9BSH3 213 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 DPCDQ9BVM2 203 aaPredicted RBP11.68□□□□□ -0.54
VPS25-201ENST00000253794 ABCG5Q9H222 651 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 MED13LQ71F56 2210 aa11.68□□□□□ -0.54
VPS25-201ENST00000253794 YLPM1P49750 1951 aaKnown RBP11.68□□□□□ -0.54
VPS25-201ENST00000253794 LOC105371242A0A075B767 164 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 A0A0A6YYH2 397 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 METTL21EPA6NDL7 271 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 A6NJ64 397 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 C22orf46C9J442 243 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 RAB27BO00194 218 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
VPS25-201ENST00000253794 CA11O75493 328 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 GATA3P23771 443 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 SOX6P35712 828 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 DVL1P1P54792 670 aaPredicted RBP11.67□□□□□ -0.54
VPS25-201ENST00000253794 TMEM50BP56557 158 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 MEF2CQ06413 473 aaPredicted RBP11.67□□□□□ -0.54
VPS25-201ENST00000253794 RBM39Q14498 530 aaKnown RBP11.67□□□□□ -0.54
VPS25-201ENST00000253794 PDCD1Q15116 288 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 GRK1Q15835 563 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 PAN3Q58A45 887 aaKnown RBP11.67□□□□□ -0.54
VPS25-201ENST00000253794 BTN2A1Q7KYR7 527 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 FGFRL1Q8N441 504 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 RAB40AQ8WXH6 277 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 ST8SIA4Q92187 359 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 COQ2Q96H96 371 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 BATF3Q9NR55 127 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 RHBDL2Q9NX52 303 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 LPAR3Q9UBY5 353 aa11.67□□□□□ -0.54
VPS25-201ENST00000253794 RPUSD1Q9UJJ7 312 aaKnown RBP11.67□□□□□ -0.54
VPS25-201ENST00000253794 A0A075B6Q4 140 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 IGHV2-70DA0A0C4DH43 119 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 KIR2DS1A0A191URI9 304 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 FUOMA2VDF0 154 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 CCDC160A6NGH7 325 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 SMAD7O15105 426 aaKnown RBP11.66□□□□□ -0.54
VPS25-201ENST00000253794 CD5LO43866 347 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 LIPFP07098 398 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 P2RX3P56373 397 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 SCN1BQ07699 218 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 UBE2NLQ5JXB2 153 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 RAB12Q6IQ22 244 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 TMEM186Q96B77 213 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 SLIRPQ9GZT3 109 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms