RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 TBR1Q16650 682 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 OR52W1Q6IF63 320 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 PRSS45Q7RTY3 260 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 SPICQ8N5J4 248 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 SCCPDHQ8NBX0 429 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 NUDCD2Q8WVJ2 157 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 SLC7A6Q92536 515 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 UNKLQ9H9P5 680 aaKnown RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 PRSS50Q9UI38 385 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 AMMECR1Q9Y4X0 333 aaPredicted RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.8□□□□□ -1.646e-7■■■■□ 22.5
CHD2-227ENST00000637572 DENND4CQ5VZ89 1909 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 GPR31O00270 319 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 TUSC2O75896 110 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 IGHG3P01860 377 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 TPT1P13693 172 aaKnown RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 PRF1P14222 555 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 NFYBP25208 207 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 FCGR2CP31995 323 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 KIR3DL2P43630 455 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 KIR2DS2P43631 304 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 NPY4RP50391 375 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 SUCLG1P53597 346 aaKnown RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 GAS1P54826 345 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 TMEM30BQ3MIR4 351 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 OR10K2Q6IF99 312 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 Q6ZNX1 250 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 OR51A4Q8NGJ6 313 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 PIK3IP1Q96FE7 263 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 ADTRPQ96IZ2 230 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 ZDHHC11Q9H8X9 412 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 FAM206AQ9NX38 181 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 RASL12Q9NYN1 266 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 PLEKHB1Q9UF11 243 aaPredicted RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 PURGQ9UJV8 347 aaKnown RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 TRBV5-7A0A0A0MS05 114 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 K7ENP7 123 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 AKR7A2O43488 359 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 HOXB5P09067 269 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 GIPP09681 153 aaPredicted RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 DUSP1P28562 367 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 GLRXP35754 106 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 SLC9A3R2Q15599 337 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 C1orf100Q5SVJ3 147 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 FAHD2BQ6P2I3 314 aaPredicted RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 UNQ9370/PRO34162Q6UXP9 181 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 TMEM91Q6ZNR0 172 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 OR8G5Q8NG78 346 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 TCTEX1D2Q8WW35 142 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 FAHD2AQ96GK7 314 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 CIB3Q96Q77 187 aaPredicted RBP4.8□□□□□ -1.64
CHD2-227ENST00000637572 PBDC1Q9BVG4 233 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 ZNF665Q9H7R5 613 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 ASCL3Q9NQ33 180 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 OR2S2Q9NQN1 319 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 RNF115Q9Y4L5 304 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 CLDN16Q9Y5I7 305 aa4.8□□□□□ -1.64
CHD2-227ENST00000637572 TNRC18O15417 2968 aaPredicted RBP4.79□□□□□ -1.64
CHD2-227ENST00000637572 H3BMH7 237 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 SEMA7AO75326 666 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 CD3DP04234 171 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 FABP1P07148 127 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 CCL2P13500 99 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 ADRA2CP18825 462 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 HRH1P35367 487 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 CEACAM3P40198 252 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 OR3A4PP47883 348 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 ESCO2Q56NI9 601 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 TMEM128Q5BJH2 165 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 AKR1C8PQ5T2L2 129 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 TMEM123Q8N131 208 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 OR14K1Q8NGZ2 314 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 RCC1LQ96I51 464 aaKnown RBP4.79□□□□□ -1.64
CHD2-227ENST00000637572 DHRS9Q9BPW9 319 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 OR2J1Q9GZK6 312 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 WNT5BQ9H1J7 359 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 DEPPQ9NTK1 212 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 STARD10Q9Y365 291 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 VCANP13611 3396 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 SMCO3A2RU48 225 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 K7EPK0 472 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 DFFBO76075 338 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 TOXO94900 526 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 COX6B1P14854 86 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 NANOS3P60323 173 aaKnown RBP4.79□□□□□ -1.64
CHD2-227ENST00000637572 BLOC1S1P78537 153 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 SCGB2A2Q13296 93 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 PMS2P11Q13670 270 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 ZNF266Q14584 549 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 LTC4SQ16873 150 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
CHD2-227ENST00000637572 KRBOX4Q5JUW0 171 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 OVCH2Q7RTZ1 564 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 H2BFWTQ7Z2G1 175 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 FAM71E2Q8N5Q1 922 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 OR8B3Q8NGG8 313 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 OR5H6Q8NGV6 325 aa4.79□□□□□ -1.64
CHD2-227ENST00000637572 GLYATL2Q8WU03 294 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms