RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 CPOQ8IVL8 374 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 GID4Q8IVV7 300 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 DRAM1Q8N682 238 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 TCEANCQ8N8B7 351 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 POC1AQ8NBT0 407 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 OR51L1Q8NGJ5 315 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 IL17DQ8TAD2 202 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 FAM81AQ8TBF8 368 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 TMEM163Q8TC26 289 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 NMNAT2Q9BZQ4 307 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 OR10A2Q9H208 303 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 MED20Q9H944 212 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 ISYNA1Q9NPH2 558 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 BRD7Q9NPI1 651 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 C19orf73Q9NVV2 129 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 OR14J1Q9UGF5 321 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 GMPPBQ9Y5P6 360 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 COMMD3-BMI1R4GMX3 469 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 DNAH2Q9P225 4427 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 CLUP10909 449 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 PEX2P28328 305 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 GSTT1P30711 240 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 ARHGDIBP52566 201 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 GRB2P62993 217 aaKnown RBP10.81□□□□□ -0.68
SNX1-214ENST00000625244 GNG3P63215 75 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 CEP78Q5JTW2 689 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 ASPHD1Q5U4P2 390 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 BATF2Q8N1L9 274 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 C5orf56Q8N8D9 126 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 OR11H1Q8NG94 326 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 OR8J1Q8NGP2 316 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 HIST1H2AAQ96QV6 131 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 INTS14Q96SY0 518 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 SLC29A1Q99808 456 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 DSCAML1Q8TD84 2053 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 DNAH6Q9C0G6 4158 aa10.81□□□□□ -0.68
SNX1-214ENST00000625244 TNCP24821 2201 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 SNTNA6NMZ2 147 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 LEUTXA8MZ59 168 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 CASQ2O14958 399 aaPredicted RBP10.8□□□□□ -0.68
SNX1-214ENST00000625244 PRKYO43930 277 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 MPZL2O60487 215 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 IGHG2P01859 326 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 IFNA6P05013 189 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 HSD11B1P28845 292 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 EPHA2P29317 976 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 POLR2IP36954 125 aaKnown RBP10.8□□□□□ -0.68
SNX1-214ENST00000625244 BDH1Q02338 343 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 APOFQ13790 326 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 PNLIPRP3Q17RR3 467 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 CXorf66Q5JRM2 361 aaPredicted RBP10.8□□□□□ -0.68
SNX1-214ENST00000625244 NXNL2Q5VZ03 156 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 SHFQ7M4L6 423 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 SLC35E3Q7Z769 313 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 ERI1Q8IV48 349 aaKnown RBP10.8□□□□□ -0.68
SNX1-214ENST00000625244 Q8N1Y9 231 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 ABHD12Q8N2K0 398 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 OR6N2Q8NGY6 317 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 C4orf3Q8WVX3 66 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 TRUB1Q8WWH5 349 aaKnown RBP10.8□□□□□ -0.68
SNX1-214ENST00000625244 RFKQ969G6 155 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 PGAM5Q96HS1 289 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 HRASLS5Q96KN8 279 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 IL4I1Q96RQ9 567 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 APOL4Q9BPW4 351 aa10.8□□□□□ -0.68
SNX1-214ENST00000625244 LOC100130705A0A1B0GUX0 176 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 ZNF593O00488 134 aaPredicted RBP10.79□□□□□ -0.68
SNX1-214ENST00000625244 FAM106CPP0CH98 169 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 SLC15A1P46059 708 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 MTNR1BP49286 362 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 POU3F4P49335 361 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 HAGHQ16775 308 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 CEACAM21Q3KPI0 293 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 OGFRL1Q5TC84 451 aaPredicted RBP10.79□□□□□ -0.68
SNX1-214ENST00000625244 TTC23Q5W5X9 447 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 GDPD3Q7L5L3 318 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 FOXRED2Q8IWF2 684 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 RPP25LQ8N5L8 163 aaKnown RBP10.79□□□□□ -0.68
SNX1-214ENST00000625244 RNF152Q8N8N0 203 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 ASCC1Q8N9N2 400 aaKnown RBP10.79□□□□□ -0.68
SNX1-214ENST00000625244 ZNF511Q8NB15 262 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 CYGBQ8WWM9 190 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 NRIP2Q9BQI9 281 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 RGCCQ9H4X1 137 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 SLC22A13Q9Y226 551 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 DNAH11Q96DT5 4516 aa10.79□□□□□ -0.68
SNX1-214ENST00000625244 FAM172BPA6NC97 362 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A18PA6NE21 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A16PA6NEW6 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A20PA6NIJ5 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A9PA6NNJ1 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A12PA8MX19 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A5PA8MXJ8 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 A8MZ25 164 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 H3BSH0 61 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 M0R129 80 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 ZNF737O75373 536 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 SAP30O75446 220 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 NXPH2O95156 264 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms