RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 OR5V1Q9UGF6 321 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 SLC23A1Q9UHI7 598 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PFDN2Q9UHV9 154 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 DUSP13Q9UII6 198 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PURGQ9UJV8 347 aaKnown RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 LRP12Q9Y561 859 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FBN1P35555 2871 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 MALRD1Q5VYJ5 2156 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 A0A096LNT2 108 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 A0A1B0GTI1 187 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 A0A1B0GWJ7 208 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 GGT3PA6NGU5 568 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 B4DSR2 109 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 DISC1C4P0D8 188 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 TEX46H3BTG2 121 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 H3BUI4 141 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 PIN1P1O15428 100 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 RP2O75695 350 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 B3GALNT1O75752 331 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 OR2F2O95006 317 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 IGLV3-1P01715 115 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 HPXP02790 462 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 LPLP06858 475 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 H2BFMP0C1H6 154 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 UBCP0CG48 685 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 DAOP14920 347 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 KITLGP21583 273 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 ACKR3P25106 362 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 PSMB10P40306 273 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 MAGEB1P43366 347 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 KIR3DL2P43630 455 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SLC6A9P48067 706 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SRP9P49458 86 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF81P51508 661 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 TAS2R20P59543 309 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 NANOS3P60323 173 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SEC61A1P61619 476 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 TSPAN5P62079 268 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 GRB2P62993 217 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 EIF5AP63241 154 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 MALLQ13021 153 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 OR2F1Q13607 317 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF345Q14585 488 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 INSL4Q14641 139 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 TAF13Q15543 124 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 RAB11BQ15907 218 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 NKPD1Q17RQ9 610 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM249Q2WGJ8 235 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 DRAM2Q6UX65 266 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 FAM57BQ71RH2 274 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 NLRC3Q7RTR2 1065 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 HSD17B13Q7Z5P4 300 aaPredicted RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 LRRTM1Q86UE6 522 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SLC51BQ86UW2 128 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 OR5AS1Q8N127 324 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 PRSS35Q8N3Z0 413 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF283Q8N7M2 679 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 OR52I2Q8NH67 350 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 LGALS14Q8TCE9 139 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 GPX8Q8TED1 209 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 RAB1CQ92928 201 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SPTSSAQ969W0 71 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM106AQ96A25 262 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SPSB4Q96A44 273 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 APOBEC3DQ96AK3 386 aaPredicted RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 ORAI1Q96D31 301 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 RAB39BQ96DA2 213 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 CITED4Q96RK1 184 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 PRRT1Q99946 306 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 VRK1Q99986 396 aaPredicted RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 PDCD1LG2Q9BQ51 273 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 UQCC2Q9BRT2 126 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 BEX2Q9BXY8 128 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 METTL17Q9H7H0 456 aaPredicted RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 MSL2Q9HCI7 577 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 DECR2Q9NUI1 292 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 DCAF16Q9NXF7 216 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SLC2A8Q9NY64 477 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 COMMD9Q9P000 198 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 MGAT4CQ9UBM8 478 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 GHRLQ9UBU3 117 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 IL19Q9UHD0 177 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 RAB22AQ9UL26 194 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 HHLA2Q9UM44 414 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 DHDHQ9UQ10 334 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 SLC22A13Q9Y226 551 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 ARHGAP32A7KAX9 2087 aa4.44□□□□□ -1.7
SHMT1-211ENST00000618902 YLPM1P49750 1951 aaKnown RBP4.44□□□□□ -1.7
SHMT1-211ENST00000618902 NBEAL1Q6ZS30 2694 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CR1P17927 2039 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 IGHV4-30-2A0A087WSY4 118 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 hCG_38984A0A1B0GV85 526 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 SMIM30A4D0T7 59 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 RFPL4AA6NLU0 287 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CD300LBA8K4G0 201 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 IQCF6A8MYZ5 107 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 RNF223E7ERA6 249 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 F5H5P2 479 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 RFPL4AL1F8VTS6 287 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 H0YL77 283 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms