RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TPRX1Q8N7U7 411 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 ASCC1Q8N9N2 400 aaKnown RBP2.93□□□□□ -1.94
LIG4-205ENST00000614526 OR2Z1Q8NG97 314 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 OR5A2Q8NGI9 324 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 MBD3L2Q8NHZ7 208 aaPredicted RBP2.93□□□□□ -1.94
LIG4-205ENST00000614526 FAM57AQ8TBR7 257 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 MUCL1Q96DR8 90 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 CPNE2Q96FN4 548 aaPredicted RBP2.93□□□□□ -1.94
LIG4-205ENST00000614526 PLPPR2Q96GM1 343 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 GSKIPQ9P0R6 139 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 Q9UFV3 132 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 SLC23A1Q9UHI7 598 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 ANXA10Q9UJ72 324 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 IGHV2OR16-5A0A0B4J2B6 119 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 TEX13DA0A0J9YY54 714 aaPredicted RBP2.93□□□□□ -1.94
LIG4-205ENST00000614526 C9orf170A2RU37 121 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 G3V3Q6 166 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 SLC33A1O00400 549 aaPredicted RBP2.93□□□□□ -1.94
LIG4-205ENST00000614526 CDK2AP1O14519 115 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 MLNRO43193 412 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 TPPPO94811 219 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 IGKV3-15P01624 115 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 IL5P05113 134 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 COX5AP20674 150 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 SSBP1Q04837 148 aaKnown RBP2.93□□□□□ -1.94
LIG4-205ENST00000614526 FAM201AQ5SY85 155 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 FAM53AQ6NSI3 398 aaPredicted RBP2.93□□□□□ -1.94
LIG4-205ENST00000614526 Q6ZR03 302 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 OVCH2Q7RTZ1 564 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 ZNF573Q86YE8 665 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 FAM58AQ8N1B3 248 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 C9orf62Q8N4C0 152 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 CCDC54Q8NEL0 328 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 PXT1Q8NFP0 134 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 OR11L1Q8NGX0 322 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 TMEM230Q96A57 120 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 ELMOD3Q96FG2 381 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 HYLS1Q96M11 299 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 TMEM100Q9NV29 134 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 ATPIF1Q9UII2 106 aa2.93□□□□□ -1.94
LIG4-205ENST00000614526 ZFYVE26Q68DK2 2539 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SNRPGP15A8MWD9 76 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 MCRIP1C9JLW8 97 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 DEGS1O15121 323 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 TNFSF12O43508 249 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ZBTB25P24278 435 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 FGF12P61328 243 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 NAAAQ02083 359 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 P2RY6Q15077 328 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PPA1Q15181 289 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 FAM189A2Q15884 450 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 KRTCAP3Q53RY4 240 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SPIN3Q5JUX0 258 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 CLEC18BQ6UXF7 455 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 FBXW12Q6X9E4 464 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 LYG2Q86SG7 212 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SLC25A42Q86VD7 318 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SUMF2Q8NBJ7 301 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ZFAND1Q8TCF1 268 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RTBDNQ9BSG5 229 aaPredicted RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 RTL8AQ9BWD3 113 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 OR51I2Q9H344 312 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RANBP3Q9H6Z4 567 aaPredicted RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 METTL8Q9H825 291 aaKnown RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 TMEM165Q9HC07 324 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RDH8Q9NYR8 311 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PURGQ9UJV8 347 aaKnown RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 GPR132Q9UNW8 380 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 MPC1Q9Y5U8 109 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SLC25A15Q9Y619 301 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 IGHV3OR15-7A0A075B7D8 119 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 A8MXE2 369 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 TEX46H3BTG2 121 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RGS11O94810 467 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 IGHV3-13P01766 116 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 IGHV3-7P01780 117 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 CRYAAP02489 173 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RAC2P15153 192 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PPP3CBP16298 524 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 CBX5P45973 191 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 TDGF1P3P51864 188 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 TMPRSS3P57727 454 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 TAS2R46P59540 309 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 GRK1Q15835 563 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 LTC4SQ16873 150 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ANKRD55Q3KP44 614 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 ZNF718Q3SXZ3 478 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PAN3Q58A45 887 aaKnown RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 LY6G6FQ5SQ64 297 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 RGS7BPQ6MZT1 257 aaPredicted RBP2.92□□□□□ -1.94
LIG4-205ENST00000614526 ASCL4Q6XD76 172 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 DEFB108BQ8NET1 73 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 SECTM1Q8WVN6 248 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 C12orf4Q9NQ89 552 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 OPN4Q9UHM6 478 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 MED13LQ71F56 2210 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 PKD1L2Q7Z442 2459 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 TRAV24A0A0B4J272 114 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 OR5B21A6NL26 309 aa2.92□□□□□ -1.94
LIG4-205ENST00000614526 L7N2F9 121 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms