RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TNFAIP8L1Q8WVP5 186 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 CNBD2Q96M20 576 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 DUX5Q96PT3 197 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 OR5M11Q96RB7 305 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 EXOSC4Q9NPD3 245 aaKnown RBP13.7□□□□□ -0.22
SSBP4-213ENST00000602088 NOX4Q9NPH5 578 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 DSCAML1Q8TD84 2053 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 TRAV8-7A0A075B6U6 113 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 A0A0U1RQK1 487 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 A0A1W2PPK0 400 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 CLDN34H7C241 214 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 RGS10O43665 173 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 OR2H2O95918 312 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 CCL3L1P16619 93 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 FSTP19883 344 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 ZNF93P35789 620 aaPredicted RBP13.69□□□□□ -0.22
SSBP4-213ENST00000602088 TGFBR2P37173 567 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 OR3A1P47881 315 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 MTNR1BP49286 362 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 BMXP51813 675 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 UBE2E1P51965 193 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 DLX6P56179 175 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 EDDM3BP56851 147 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 MEF2CQ06413 473 aaPredicted RBP13.69□□□□□ -0.22
SSBP4-213ENST00000602088 KLRD1Q13241 179 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 ZNF273Q14593 569 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 SLC9A3R2Q15599 337 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 GRK1Q15835 563 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 DDI2Q5TDH0 399 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 NCR3LG1Q68D85 454 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 Q8NFD4 153 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 OR4S1Q8NGB4 309 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 ZDHHC16Q969W1 377 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 DERL3Q96Q80 235 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 NKX3-1Q99801 234 aaPredicted RBP13.69□□□□□ -0.22
SSBP4-213ENST00000602088 CHST6Q9GZX3 395 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 ZMAT3Q9HA38 289 aaKnown RBP13.69□□□□□ -0.22
SSBP4-213ENST00000602088 CKLFQ9UBR5 152 aa13.69□□□□□ -0.22
SSBP4-213ENST00000602088 SIRPB1O00241 398 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 MGST3O14880 152 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 HOXA3O43365 443 aaPredicted RBP13.68□□□□□ -0.22
SSBP4-213ENST00000602088 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
SSBP4-213ENST00000602088 OR3A4PP47883 348 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 MED22Q15528 200 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 Q6P435 159 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 Q6YL49 198 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 PRSS48Q7RTY5 328 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 OR51T1Q8NGJ9 327 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 PPP1R35Q8TAP8 253 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 THRSPQ92748 146 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 SLC25A28Q96A46 364 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 FOXJ3Q9UPW0 622 aa13.68□□□□□ -0.22
SSBP4-213ENST00000602088 A0A0G2JK05 382 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 hCG_1809904A0A1W2PP81 198 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 A0A1W2PPE2 198 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 A0A1W2PR64 198 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 A0A1W2PRV1 198 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 MAGEA13PA6NCF6 341 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 C17orf98A8MV24 154 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 NPFFO15130 113 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 PIN1P1O15428 100 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 RNASE1P07998 156 aaKnown RBP13.67□□□□□ -0.22
SSBP4-213ENST00000602088 ZNF728P0DKX0 622 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 ZNF44P15621 663 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 ERP29P30040 261 aaKnown RBP13.67□□□□□ -0.22
SSBP4-213ENST00000602088 ERVFRD-1P60508 538 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 ACTG1P63261 375 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 GPR50Q13585 617 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 EDDM3AQ14507 147 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 RSU1Q15404 277 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 RBM48Q5RL73 367 aaKnown RBP13.67□□□□□ -0.22
SSBP4-213ENST00000602088 UNQ9370/PRO34162Q6UXP9 181 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 MS4A15Q8N5U1 240 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 TPRX1Q8N7U7 411 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 CHST4Q8NCG5 386 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 OR10K1Q8NGX5 313 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 ZNF184Q99676 751 aaPredicted RBP13.67□□□□□ -0.22
SSBP4-213ENST00000602088 FAM192AQ9GZU8 254 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 HEXA-AS1Q9H8Q6 139 aa13.67□□□□□ -0.22
SSBP4-213ENST00000602088 A0A1W2PRD5 423 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 A0A1W2PRF3 423 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 A0A1W2PRM7 423 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 hADV38S2A0JD32 116 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 MEX3AA1L020 520 aaKnown RBP13.66□□□□□ -0.22
SSBP4-213ENST00000602088 TMEM89A2RUT3 159 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 SLC33A1O00400 549 aaPredicted RBP13.66□□□□□ -0.22
SSBP4-213ENST00000602088 DEGS1O15121 323 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 CDRT1O95170 752 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 MELTFP08582 738 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 MAPK3P27361 379 aaPredicted RBP13.66□□□□□ -0.22
SSBP4-213ENST00000602088 SAA4P35542 130 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 SCN1BQ07699 218 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 ACSM3Q53FZ2 586 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 TCF23Q7RTU1 214 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 CDH26Q8IXH8 852 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 PNKDQ8N490 385 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 NR1H4Q96RI1 486 aaPredicted RBP13.66□□□□□ -0.22
SSBP4-213ENST00000602088 CCDC90BQ9GZT6 254 aa13.66□□□□□ -0.22
SSBP4-213ENST00000602088 METTL9Q9H1A3 318 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms