RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SYNPRQ8TBG9 265 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 KLF14Q8TD94 323 aaPredicted RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 Q96M85 177 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 NSMCE2Q96MF7 247 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 TSPAN32Q96QS1 320 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCT8L2Q96SF2 557 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ATG101Q9BSB4 218 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR2H1Q9GZK4 316 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 C1orf21Q9H246 121 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 JPT2Q9H910 190 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ELOVL3Q9HB03 270 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 DYNLRB1Q9NP97 96 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCNB1IP1Q9NPC3 277 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 YAE1D1Q9NRH1 226 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 IL20Q9NYY1 176 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 ACTR3BQ9P1U1 418 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 MYEF2Q9P2K5 600 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 EIF3KQ9UBQ5 218 aaKnown RBP2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 AURKCQ9UQB9 309 aa2.82□□□□□ -1.96
CKS1BP3-201ENST00000600888 CUBNO60494 3623 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SVEP1Q4LDE5 3571 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PPIAL4EA0A075B759 164 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 IGLV1-36A0A0B4J1U3 117 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PPIAL4CA0A0B4J2A2 164 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 IGHV1-69-2A0A0G2JMI3 117 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 A0A1B0GWJ7 208 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 C5orf49A4QMS7 147 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR6C6A6NF89 314 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PPIAL4DF5H284 164 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 DYNC1I1O14576 645 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 CTDSPLO15194 276 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SGCEO43556 437 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 FSTL3O95633 263 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 FAM107AO95990 144 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 TGFAP01135 160 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 FABP3P05413 133 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PPIAL4FP0DN26 164 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCL2P13500 99 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 FOLR2P14207 255 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ANPEPP15144 967 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 CTLA4P16410 223 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 HNF1AP20823 631 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 KITLGP21583 273 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PCMT1P22061 227 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 CALB2P22676 271 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 IGFBP5P24593 272 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 COL8A2P25067 703 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 IFNGR2P38484 337 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ALDH3B1P43353 468 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 GPR6P46095 362 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 IER3P46695 156 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 RGS6P49758 472 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ARHGDIAP52565 204 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ERVS71-1P61550 626 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PPP1CBP62140 327 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SRPXP78539 464 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 GLO1Q04760 184 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC3A1Q07837 685 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 TSPAN31Q12999 210 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PSG7Q13046 419 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 MAD2L1BPQ15013 274 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 RFX4Q33E94 735 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 CCDC92Q53HC0 331 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM255AQ5JRV8 349 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 FAM120AOSQ5T036 256 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 LCN8Q6JVE9 175 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 DNM1P34Q6PK57 102 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 FBXW12Q6X9E4 464 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 RASSF6Q6ZTQ3 369 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC25A42Q86VD7 318 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZDHHC21Q8IVQ6 265 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 DEFB107AQ8IZN7 70 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SPAG16Q8N0X2 631 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 RNF148Q8N7C7 305 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 FAM86B1Q8N7N1 296 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 CLDN22Q8N7P3 220 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC26A10Q8NG04 563 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 AKR7LQ8NHP1 331 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC25A40Q8TBP6 338 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 GNPDA2Q8TDQ7 276 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PTP4A1Q93096 173 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 TOMM40LQ969M1 308 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 YIPF5Q969M3 257 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 MCUR1Q96AQ8 359 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 RASD2Q96D21 266 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 HAVCR1Q96D42 359 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 GPA33Q99795 319 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 COQ7Q99807 217 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 BEX2Q9BXY8 128 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR2J1Q9GZK6 312 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 HDHD2Q9H0R4 259 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 SYT4Q9H2B2 425 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR52D1Q9H346 318 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 TPK1Q9H3S4 243 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF275Q9NSD4 429 aaPredicted RBP2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 ADA2Q9NZK5 511 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 TAAR3PQ9P1P4 343 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 DNAJB9Q9UBS3 223 aa2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 PRPF19Q9UMS4 504 aaKnown RBP2.81□□□□□ -1.96
CKS1BP3-201ENST00000600888 GPR132Q9UNW8 380 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms