RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PPIAL4GP0DN37 164 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 CFHR2P36980 270 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 ZP1P60852 638 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 FGF12P61328 243 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 MZT2AQ6P582 158 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 SLC36A1Q7Z2H8 476 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 SIGLECL1Q8N7X8 197 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
COMMD4-225ENST00000569245 PNLDC1Q8NA58 520 aaKnown RBP12□□□□□ -0.49
COMMD4-225ENST00000569245 OR4D6Q8NGJ1 314 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 OR10Z1Q8NGY1 313 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 SPACA5Q96QH8 159 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 GPER1Q99527 375 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 WDR13Q9H1Z4 485 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 LIN7BQ9HAP6 207 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 SMURF1Q9HCE7 757 aa12□□□□□ -0.49
COMMD4-225ENST00000569245 NKX6-3A6NJ46 265 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 SRRM5B3KS81 715 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-225ENST00000569245 NDUFB3O43676 98 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ECDO95905 644 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-225ENST00000569245 UBBP0CG47 229 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 IGHV4-38-2P0DP08 117 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 PTGFRP43088 359 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 BMXP51813 675 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ACTG1P63261 375 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 IKZF1Q13422 519 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 HAGHLQ6PII5 290 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ASCL4Q6XD76 172 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 BTN2A1Q7KYR7 527 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ANGPTL5Q86XS5 388 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 BCL6BQ8N143 479 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-225ENST00000569245 FAM216BQ8N7L0 139 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ZSCAN4Q8NAM6 433 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-225ENST00000569245 OR6Q1Q8NGQ2 317 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ZNF671Q8TAW3 534 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ZFAND2BQ8WV99 257 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 DACT3Q96B18 629 aaPredicted RBP11.99□□□□□ -0.49
COMMD4-225ENST00000569245 FAM3DQ96BQ1 224 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 UPRTQ96BW1 309 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 CMTM3Q96MX0 182 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 PCGF1Q9BSM1 259 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 OR51I2Q9H344 312 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 KAAG1Q9UBP8 84 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 GHRLQ9UBU3 117 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 SPATA2Q9UM82 520 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 PEX16Q9Y5Y5 336 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 ETV7Q9Y603 341 aa11.99□□□□□ -0.49
COMMD4-225ENST00000569245 TRAV40A0A0B4J280 105 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 A0A1B0GW55 424 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 RHBDL1O75783 438 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 TOX4O94842 621 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 BPNT1O95861 308 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4L2P0CJ85 424 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4L3P0CJ86 424 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4L4P0CJ87 422 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4L5P0CJ88 424 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4L6P0CJ89 424 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4L7P0CJ90 424 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 SNRPBP14678 240 aaKnown RBP11.98□□□□□ -0.49
COMMD4-225ENST00000569245 GLRA1P23415 457 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 OR3A4PP47883 348 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 CLDN12P56749 244 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 P2RY14Q15391 338 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 C2orf76Q3KRA6 126 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 LRRC10Q5BKY1 277 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 METTL11BQ5VVY1 283 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4L9Q6RFH8 374 aaPredicted RBP11.98□□□□□ -0.49
COMMD4-225ENST00000569245 ZNF573Q86YE8 665 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 CALHM1Q8IU99 346 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 PXT1Q8NFP0 134 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 TBC1D15Q8TC07 691 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 TNFAIP8L1Q8WVP5 186 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 RFT1Q96AA3 541 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
COMMD4-225ENST00000569245 NKX3-1Q99801 234 aaPredicted RBP11.98□□□□□ -0.49
COMMD4-225ENST00000569245 PKIBQ9C010 78 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 C6orf62Q9GZU0 229 aaPredicted RBP11.98□□□□□ -0.49
COMMD4-225ENST00000569245 COMMD3Q9UBI1 195 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 DUX4Q9UBX2 424 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 FBLN5Q9UBX5 448 aa11.98□□□□□ -0.49
COMMD4-225ENST00000569245 MRPS28Q9Y2Q9 187 aaKnown RBP11.98□□□□□ -0.49
COMMD4-225ENST00000569245 A0A0B4J203 849 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 CTDSP2O14595 271 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 LDLRAD4O15165 306 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 PAHP00439 452 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 ARSBP15848 533 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 MPZP25189 248 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 HAAOP46952 286 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 GABRA2P47869 451 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 POU3F4P49335 361 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 QRFPP83859 136 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 PDZK1IP1Q13113 114 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 GPR157Q5UAW9 335 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 STUMQ69YW2 141 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 AWAT2Q6E213 333 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 GLIPR1L1Q6UWM5 242 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 SAXO1Q8IYX7 474 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 OR51D1Q8NGF3 324 aa11.97□□□□□ -0.49
COMMD4-225ENST00000569245 OR5H6Q8NGV6 325 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 479.8 ms