RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 IGHV1OR21-1A0A087WYE8 117 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 UBE2L5PA0A1B0GUS4 154 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 PPYP01298 95 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 ZNF32P17041 273 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 FOLR3P41439 243 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 TBC1D26Q86UD7 250 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 BAGE3Q86Y29 109 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 BAGE2Q86Y30 109 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 ZNF808Q8N4W9 903 aaPredicted RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 ADPRHL1Q8NDY3 354 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 GGACTQ9BVM4 153 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 OR51I2Q9H344 312 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 P4HTMQ9NXG6 502 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 SNRNP200O75643 2136 aaKnown RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 MDFIC2A0A1B0GVS7 189 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 A6NCN8 305 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 MASP2O00187 686 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 MPPED1O15442 326 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 GATCO43716 136 aaKnown RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 MELTFP08582 738 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 PGA3P0DJD8 388 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 FCARP24071 287 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 FUT6P51993 359 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 ERVS71-1P61550 626 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 ZNF880Q6PDB4 577 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 C1QL2Q7Z5L3 287 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 OR5AS1Q8N127 324 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 CA5BP1Q8WTZ4 195 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 ADIPOR1Q96A54 375 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 SCARF2Q96GP6 870 aaPredicted RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 FAM234AQ9H0X4 552 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 PLEKHA3Q9HB20 300 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 METTL1Q9UBP6 276 aaKnown RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 OSGIN2Q9Y236 505 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 C5orf49A4QMS7 147 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 TGOLN2O43493 480 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 FBP1P09467 338 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 IGFBP3P17936 291 aaPredicted RBP9.22□□□□□ -0.93
USB1-212ENST00000566082 PAX6P26367 422 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 GALNSP34059 522 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 TMEM50BP56557 158 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 FHL1Q13642 323 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 SMIM8Q96KF7 97 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 XKRY2A2RUG3 117 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 OR5H1A6NKK0 313 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 ZNF814B7Z6K7 855 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 DEGS1O15121 323 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 CTXN2P0C2S0 81 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 BMP5P22003 454 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 FKBP2P26885 142 aaKnown RBP9.22□□□□□ -0.93
USB1-212ENST00000566082 GPM6AP51674 278 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 PAQR4Q8N4S7 273 aaPredicted RBP9.22□□□□□ -0.93
USB1-212ENST00000566082 OR52M1Q8NGK5 317 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 LANCL2Q9NS86 450 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 RNF150Q9ULK6 438 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 MEX3AA1L020 520 aaKnown RBP9.22□□□□□ -0.93
USB1-212ENST00000566082 ZNF320A2RRD8 509 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 CLEC18AA5D8T8 446 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 MAP1LC3B2A6NCE7 125 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 IFI6P09912 130 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 GLB1P16278 677 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 HLA-GP17693 338 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 ACKR3P25106 362 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 UBE2G2P60604 165 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 C1orf53Q5VUE5 145 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 ZNF574Q6ZN55 896 aaPredicted RBP9.22□□□□□ -0.93
USB1-212ENST00000566082 RTN4RL2Q86UN3 420 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 CLEC18CQ8NCF0 446 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 FLVCR1-AS1Q8TAF5 88 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 SHDQ96IW2 340 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 UCN2Q96RP3 112 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 MAP1LC3BQ9GZQ8 125 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 CHST5Q9GZS9 411 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 UCK1Q9HA47 277 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 CDH20Q9HBT6 801 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 ERRFI1Q9UJM3 462 aaPredicted RBP9.22□□□□□ -0.93
USB1-212ENST00000566082 TP53TG5Q9Y2B4 290 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 CDH23Q9H251 3354 aa9.22□□□□□ -0.93
USB1-212ENST00000566082 A8MXE2 369 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 F8VVB4 439 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 F8VWA3 439 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 NDUFA2O43678 99 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 NXPH2O95156 264 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 IGHV4-34P06331 123 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 MMP7P09237 267 aaPredicted RBP9.21□□□□□ -0.93
USB1-212ENST00000566082 MMP9P14780 707 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 UBE2NP61088 152 aaKnown RBP9.21□□□□□ -0.93
USB1-212ENST00000566082 PMS2P11Q13670 270 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 ANKRD37Q7Z713 158 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 GAPTQ8N292 157 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.93
USB1-212ENST00000566082 MTCH2Q9Y6C9 303 aa9.21□□□□□ -0.93
USB1-212ENST00000566082 ZNF732B4DXR9 585 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 SIRPB1O00241 398 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 DANCRP0C864 163 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 HYAL1Q12794 435 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 SYT13Q7L8C5 426 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 CACNG5Q9UF02 275 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 TRPM7Q96QT4 1865 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 TGIF2-C20orf24A0A0A6YYL0 155 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms