RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ZNF729A6NN14 1252 aaPredicted RBP2.5□□□□□ -2.01
LINC00557-201ENST00000563184 A8MWP4 228 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 ZMPSTE24O75844 475 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 CGB3P0DN86 165 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 CGB7P0DN87 165 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 TGFBR2P37173 567 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 XKP51811 444 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 STX4Q12846 297 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 ACTBL2Q562R1 376 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 UBE2NLQ5JXB2 153 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 ZNF773Q6PK81 442 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 CYP4Z1Q86W10 505 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 IGF2BP2-AS1Q96M15 143 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 TXNIPQ9H3M7 391 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 NOS1P29475 1434 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 SSH2Q76I76 1423 aa2.5□□□□□ -2.01
LINC00557-201ENST00000563184 IGHV3-21A0A0B4J1V1 117 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 IGKV1D-33P01593 117 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 IGKV1-33P01594 117 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 IGHV3-53P01767 116 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 CECR9P0C854 216 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 PRPS1L1P21108 318 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 NUP62P37198 522 aaPredicted RBP2.49□□□□□ -2.01
LINC00557-201ENST00000563184 C18orf21Q32NC0 220 aaPredicted RBP2.49□□□□□ -2.01
LINC00557-201ENST00000563184 TMEM215Q68D42 235 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 MARCH3Q86UD3 253 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 COMTD1Q86VU5 262 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 RPRMLQ8N4K4 120 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 DRAXINQ8NBI3 349 aaPredicted RBP2.49□□□□□ -2.01
LINC00557-201ENST00000563184 LY6G5BQ8NDX9 201 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 OR2M3Q8NG83 312 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 MUC7Q8TAX7 377 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 C2orf15Q8WU43 125 aaKnown RBP2.49□□□□□ -2.01
LINC00557-201ENST00000563184 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
LINC00557-201ENST00000563184 ZNF75CPQ92670 426 aaPredicted RBP2.49□□□□□ -2.01
LINC00557-201ENST00000563184 GLT1D1Q96MS3 346 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 ZNF75AQ96N20 296 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 CIB1Q99828 191 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 PLEKHA1Q9HB21 404 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 DNAJC27Q9NZQ0 273 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 CLEC2DQ9UHP7 191 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 TRAPPC1Q9Y5R8 145 aa2.49□□□□□ -2.01
LINC00557-201ENST00000563184 NLRC5Q86WI3 1866 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 MYBPHLA2RUH7 354 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 MGAT4DA6NG13 374 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 NDUFS8O00217 210 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 IGKV5-2P06315 115 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 SOD3P08294 240 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 DNASE1L1P49184 302 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 CCL23P55773 120 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 RAB38P57729 211 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 BNIP2Q12982 314 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 ERICH5Q6P6B1 374 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 DPPA2Q7Z7J5 298 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 OR6K3Q8NGY3 331 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 CPB2Q96IY4 423 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 BIRC8Q96P09 236 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 COPS4Q9BT78 406 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 PRRG3Q9BZD7 231 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 RAB1BQ9H0U4 201 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 ABCG5Q9H222 651 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 SLC22A14Q9Y267 594 aa2.48□□□□□ -2.01
LINC00557-201ENST00000563184 ZNF443Q9Y2A4 671 aaPredicted RBP2.48□□□□□ -2.01
LINC00557-201ENST00000563184 NRCAMQ92823 1304 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 CD300LBA8K4G0 201 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 D6RAR5 112 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 F5H5P2 479 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 K7ERS5 55 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 MYO1DO94832 1006 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 CCNOP22674 350 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 IL12BP29460 328 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 RANBP1P43487 201 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 LGALS7P47929 136 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 GCLMP48507 274 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 SPICQ8N5J4 248 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 C3orf22Q8N5N4 141 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 EIF4E3Q8N5X7 224 aaKnown RBP2.47□□□□□ -2.01
LINC00557-201ENST00000563184 MAL2Q969L2 176 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 CYB5R1Q9UHQ9 305 aa2.47□□□□□ -2.01
LINC00557-201ENST00000563184 IGLV10-54A0A075B6I4 117 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 A0A0B4J2C4 111 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 GGTLC3B5MD39 225 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 hCG_2039718K7EN88 272 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 AQP9O43315 295 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 ZNF708P17019 499 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 CNTFRP26992 372 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 DSTNP60981 165 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 TNFRSF9Q07011 255 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 TTMPQ5BVD1 217 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 SMARCD3Q6STE5 483 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 Q6ZT83 130 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 CMTM2Q8TAZ6 248 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 LINC01587Q99440 93 aa2.46□□□□□ -2.02
LINC00557-201ENST00000563184 PGPA6NDG6 321 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 LEUTXA8MZ59 168 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 BOLA2-SMG1P6H3BVE0 249 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 HLA-AP01891 365 aaKnown RBP2.45□□□□□ -2.02
LINC00557-201ENST00000563184 PRTN3P24158 256 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 CYHR1Q6ZMK1 362 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms