RNA–Protein interactions for RNA: ENST00000560176.1

AC012409.1-201, humanhuman

TSL 3 BASIC

Gene AC012409.1, Length 358 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-201ENST00000560176 RFNGQ9Y644 331 aa3.91□□□□□ -1.78
AC012409.1-201ENST00000560176 PLXND1Q9Y4D7 1925 aa3.91□□□□□ -1.78
AC012409.1-201ENST00000560176 RBBP6Q7Z6E9 1792 aaKnown RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 TRAV30A0A087WSZ9 112 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 IGHV2-70DA0A0C4DH43 119 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 A0A1W2PP11 408 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 TMEM218A2RU14 115 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 OR5B21A6NL26 309 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 IDSB3KWA1 339 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 G3V2L1 256 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 TNFRSF11BO00300 401 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 COPEO14579 308 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CXCL13O43927 109 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 RENP00797 406 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 DBIP07108 87 aaKnown RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 BCKDHAP12694 445 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CBLP22681 906 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CHRNB4P30926 498 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 TNFSF8P32971 234 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 OR1D4P47884 311 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SSR4P51571 173 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 PDX1P52945 283 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 RPS28P62857 69 aaKnown RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 GNGT1P63211 74 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SP4Q02446 784 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CFHR3Q02985 330 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 PLP2Q04941 152 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 LTBQ06643 244 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 FAM27E3Q08E93 113 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 HTR4Q13639 388 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SLC10A1Q14973 349 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CLEC12BQ2HXU8 276 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 LDLRAD2Q5SZI1 272 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 RSBN1Q5VWQ0 802 aaPredicted RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CHMP1BQ7LBR1 199 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 BHLHA9Q7RTU4 235 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SPACA3Q8IXA5 215 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 C11orf42Q8N5U0 333 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 KLHDC9Q8NEP7 349 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 ACVR1CQ8NER5 493 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 OR2K2Q8NGT1 345 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 OR5K1Q8NHB7 308 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 C11orf45Q8TAV5 145 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SLC37A2Q8TED4 501 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 DCUN1D4Q92564 292 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 DLX4Q92988 240 aaPredicted RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SARAFQ96BY9 339 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 LINC00477Q96M19 166 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 TP53RKQ96S44 253 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 PSMB7Q99436 277 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 ZNF670Q9BS34 389 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 GATA5Q9BWX5 397 aaPredicted RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SLC17A9Q9BYT1 436 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CDC42EP4Q9H3Q1 356 aaKnown RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 PELI2Q9HAT8 420 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SDR39U1Q9NRG7 319 aaPredicted RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 PLSCR3Q9NRY6 295 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 FBXL2Q9UKC9 423 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 TRAPPC2LQ9UL33 140 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 TNFSF18Q9UNG2 199 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 WIPI2Q9Y4P8 454 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 ZNF780BQ9Y6R6 833 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 COL11A1P12107 1806 aaPredicted RBP3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 CENPFP49454 3210 aa3.9□□□□□ -1.79
AC012409.1-201ENST00000560176 IGLV3-22A0A075B6J6 115 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 TRAV36DV7A0A075B6V5 113 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 TRAV39A0A0B4J263 110 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 A0A1B0GX51 115 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 CIB4A0PJX0 185 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 C1orf196B1AJZ1 125 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 C2CD4DB7Z1M9 353 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 M0R082 166 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 M0R1B8 84 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 GAPDHSO14556 408 aaPredicted RBP3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 HSPB6O14558 160 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 CRLF1O75462 422 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 PIAS1O75925 651 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 CLDN1O95832 211 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 APOA2P02652 100 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 PFN1P07737 140 aaKnown RBP3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 ELANEP08246 267 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 SNRPCP09234 159 aaKnown RBP3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 TRAPPC2P0DI81 140 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 TRAPPC2BP0DI82 140 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 ACP2P11117 423 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 CD99P14209 185 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 GABRG2P18507 467 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 TCN2P20062 427 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 RAB3BP20337 219 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 NPY1RP25929 384 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 TSFMP43897 325 aaKnown RBP3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 GALR1P47211 349 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 PTH2RP49190 550 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 BACE1P56817 501 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 RPL27P61353 136 aaKnown RBP3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 PPP1CBP62140 327 aa3.89□□□□□ -1.79
AC012409.1-201ENST00000560176 SNRPD1P62314 119 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms